Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
EDL79922.1
Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (predicted) [Rattus norvegicus]
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Query length:
429 aa
DOMAINS: and other(s) domains
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Rtf1, isoform B
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Rtf1, isoform B [Drosophila melanogaster]
775 aa protein
accession:NP_001286717.1
RNA polymerase-associated protein RTF1 homolog
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RNA polymerase-associated protein RTF1 homolog [Danio rerio]
681 aa protein
accession:NP_001077046.1
RNA polymerase-associated protein RTF1 homolog
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RNA polymerase-associated protein RTF1 homolog [Homo sapiens]
710 aa protein
accession:NP_055953.3
RNA polymerase-associated protein RTF1 homolog
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RNA polymerase-associated protein RTF1 homolog [Mus musculus]
715 aa protein
accession:NP_084388.2
Query: Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (predicted)
...
Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (predicted) [Rattus norvegicus]
429 aa protein
accession:EDL79922.1
RNA polymerase-associated protein RTF1 homolog precursor
...
RNA polymerase-associated protein RTF1 homolog precursor [Rattus norvegicus]
715 aa protein
accession:NP_001388908.1
DOMAINS: and other(s) domains
...
Rtf1, isoform B [Drosophila melanogaster]
775 aa protein
accession:NP_001286717.1
RNA polymerase-associated protein RTF1 homolog [Danio rerio]
681 aa protein
accession:NP_001077046.1
RNA polymerase-associated protein RTF1 homolog [Homo sapiens]
710 aa protein
accession:NP_055953.3
RNA polymerase-associated protein RTF1 homolog [Mus musculus]
715 aa protein
accession:NP_084388.2
Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (predicted) [Rattus norvegicus]
429 aa protein
accession:EDL79922.1
RNA polymerase-associated protein RTF1 homolog precursor [Rattus norvegicus]
715 aa protein
accession:NP_001388908.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 894 | 894 | 100% | 0.0 | 100.00% | NP_001388908.1 | |
| 2 | 887 | 887 | 100% | 0.0 | 99.07% | NP_084388.2 | |
| 3 | 885 | 885 | 100% | 0.0 | 98.83% | NP_055953.3 | |
| 4 | 682 | 682 | 100% | 0.0 | 83.07% | NP_001077046.1 | |
| 5 | 318 | 318 | 83% | 9e-100 | 46.80% | NP_001286717.1 |