Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
EDL97034.1
similar to RIKEN cDNA 2600005C20 (predicted), isoform CRA_b [Rattus norvegicus]
...
Query length:
463 aa
DOMAINS: and other(s) domains
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ribosomal RNA processing protein 1 homolog B
...
ribosomal RNA processing protein 1 homolog B [Glycine max]
442 aa protein
accession:XP_006601411.1
ribosomal RNA processing protein 1 homolog A
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ribosomal RNA processing protein 1 homolog A [Danio rerio]
389 aa protein
accession:XP_021334757.1
ribosomal RNA processing protein 1 homolog B
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ribosomal RNA processing protein 1 homolog B [Homo sapiens]
758 aa protein
accession:NP_055871.1
ribosomal RNA processing protein 1 homolog B isoform 1
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ribosomal RNA processing protein 1 homolog B isoform 1 [Mus musculus]
724 aa protein
accession:NP_082520.2
Query: similar to RIKEN cDNA 2600005C20 (predicted), isoform CRA_b
...
similar to RIKEN cDNA 2600005C20 (predicted), isoform CRA_b [Rattus norvegicus]
463 aa protein
accession:EDL97034.1
ribosomal RNA processing protein 1 homolog B
...
ribosomal RNA processing protein 1 homolog B [Rattus norvegicus]
733 aa protein
accession:NP_001414211.1
DOMAINS: and other(s) domains
...
ribosomal RNA processing protein 1 homolog B [Glycine max]
442 aa protein
accession:XP_006601411.1
ribosomal RNA processing protein 1 homolog A [Danio rerio]
389 aa protein
accession:XP_021334757.1
ribosomal RNA processing protein 1 homolog B [Homo sapiens]
758 aa protein
accession:NP_055871.1
ribosomal RNA processing protein 1 homolog B isoform 1 [Mus musculus]
724 aa protein
accession:NP_082520.2
similar to RIKEN cDNA 2600005C20 (predicted), isoform CRA_b [Rattus norvegicus]
463 aa protein
accession:EDL97034.1
ribosomal RNA processing protein 1 homolog B [Rattus norvegicus]
733 aa protein
accession:NP_001414211.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 756 | 756 | 78% | 0.0 | 100.00% | NP_001414211.1 | |
| 2 | 649 | 649 | 75% | 0.0 | 90.52% | NP_082520.2 | |
| 3 | 560 | 560 | 78% | 0.0 | 72.39% | NP_055871.1 | |
| 4 | 285 | 285 | 73% | 6e-91 | 43.68% | XP_021334757.1 | |
| 5 | 126 | 126 | 76% | 2e-30 | 30.39% | XP_006601411.1 |