Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
EDM09308.1
POU domain, class 2, transcription factor 1, isoform CRA_d [Rattus norvegicus]
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Query length:
44 aa
DOMAINS: and other(s) domains
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Query: POU domain, class 2, transcription factor 1, isoform CRA_d
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POU domain, class 2, transcription factor 1, isoform CRA_d [Rattus norvegicus]
44 aa protein
accession:EDM09308.1
POU domain, class 2, transcription factor 1 isoform X4
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POU domain, class 2, transcription factor 1 isoform X4 [Rattus norvegicus]
712 aa protein
accession:XP_063128061.1
POU domain, class 2, transcription factor 1b isoform X2
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POU domain, class 2, transcription factor 1b isoform X2 [Danio rerio]
701 aa protein
accession:XP_068079396.1
POU domain, class 2, transcription factor 1b isoform X3
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POU domain, class 2, transcription factor 1b isoform X3 [Danio rerio]
701 aa protein
accession:XP_068079397.1
POU domain, class 2, transcription factor 1 isoform X3
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POU domain, class 2, transcription factor 1 isoform X3 [Rattus norvegicus]
745 aa protein
accession:XP_063128060.1
POU domain, class 2, transcription factor 1 isoform X1
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POU domain, class 2, transcription factor 1 isoform X1 [Rattus norvegicus]
757 aa protein
accession:XP_063128059.1
DOMAINS: and other(s) domains
...
POU domain, class 2, transcription factor 1, isoform CRA_d [Rattus norvegicus]
44 aa protein
accession:EDM09308.1
POU domain, class 2, transcription factor 1 isoform X4 [Rattus norvegicus]
712 aa protein
accession:XP_063128061.1
POU domain, class 2, transcription factor 1b isoform X2 [Danio rerio]
701 aa protein
accession:XP_068079396.1
POU domain, class 2, transcription factor 1b isoform X3 [Danio rerio]
701 aa protein
accession:XP_068079397.1
POU domain, class 2, transcription factor 1 isoform X3 [Rattus norvegicus]
745 aa protein
accession:XP_063128060.1
POU domain, class 2, transcription factor 1 isoform X1 [Rattus norvegicus]
757 aa protein
accession:XP_063128059.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 62.8 | 62.8 | 72% | 5e-13 | 96.88% | XP_063128061.1 | |
| 2 | 34.3 | 34.3 | 52% | 0.006 | 69.57% | XP_068079396.1 | |
| 3 | 60.8 | 60.8 | 72% | 2e-12 | 96.88% | XP_063128059.1 | |
| 4 | 38.1 | 38.1 | 45% | 3e-04 | 95.00% | XP_063128060.1 | |
| 5 | 34.3 | 34.3 | 52% | 0.007 | 69.57% | XP_068079397.1 |