Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
EDM11842.1
similar to leucine rich repeat containing 27 (predicted), isoform CRA_a [Rattus norvegicus]
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Query length:
409 aa
DOMAINS: and other(s) domains
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CCR4-Not complex subunit Ccr4
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CCR4-Not complex subunit Ccr4 [Schizosaccharomyces pombe]
690 aa protein
accession:NP_587901.1
leucine-rich repeat-containing protein 40
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leucine-rich repeat-containing protein 40 [Danio rerio]
601 aa protein
accession:NP_956156.2
leucine-rich repeat-containing protein 27 isoform X6
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leucine-rich repeat-containing protein 27 isoform X6 [Homo sapiens]
418 aa protein
accession:XP_016872180.1
leucine-rich repeat-containing protein 27 isoform X4
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leucine-rich repeat-containing protein 27 isoform X4 [Mus musculus]
419 aa protein
accession:XP_006536331.1
Query: similar to leucine rich repeat containing 27 (predicted), isoform CRA_a
...
similar to leucine rich repeat containing 27 (predicted), isoform CRA_a [Rattus norvegicus]
409 aa protein
accession:EDM11842.1
leucine-rich repeat-containing protein 27 isoform b
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leucine-rich repeat-containing protein 27 isoform b [Rattus norvegicus]
409 aa protein
accession:NP_001107261.2
DOMAINS: and other(s) domains
...
CCR4-Not complex subunit Ccr4 [Schizosaccharomyces pombe]
690 aa protein
accession:NP_587901.1
leucine-rich repeat-containing protein 40 [Danio rerio]
601 aa protein
accession:NP_956156.2
leucine-rich repeat-containing protein 27 isoform X6 [Homo sapiens]
418 aa protein
accession:XP_016872180.1
leucine-rich repeat-containing protein 27 isoform X4 [Mus musculus]
419 aa protein
accession:XP_006536331.1
similar to leucine rich repeat containing 27 (predicted), isoform CRA_a [Rattus norvegicus]
409 aa protein
accession:EDM11842.1
leucine-rich repeat-containing protein 27 isoform b [Rattus norvegicus]
409 aa protein
accession:NP_001107261.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 837 | 837 | 100% | 0.0 | 99.76% | NP_001107261.2 | |
| 2 | 651 | 651 | 100% | 0.0 | 78.82% | XP_006536331.1 | |
| 3 | 407 | 407 | 95% | 4e-139 | 54.80% | XP_016872180.1 | |
| 4 | 65.9 | 154 | 35% | 4e-10 | 32.70% | NP_956156.2 | |
| 5 | 58.2 | 58.2 | 29% | 1e-07 | 32.79% | NP_587901.1 |