Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
EFD93226.1
replication factor C small subunit [Candidatus Parvarchaeum acidophilus ARMAN-5]
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Query length:
313 aa
DOMAINS: and other(s) domains
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DNA replication factor C complex subunit Rfc3
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DNA replication factor C complex subunit Rfc3 [Schizosaccharomyces pombe]
342 aa protein
accession:NP_001342879.1
replication factor C subunit 2 isoform X1
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replication factor C subunit 2 isoform X1 [Glycine max]
342 aa protein
accession:XP_003526646.1
ATPase family associated with various cellular activities (AAA)
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ATPase family associated with various cellular activities (AAA) [Arabidopsis thaliana]
339 aa protein
accession:NP_564148.1
Query: replication factor C small subunit
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replication factor C small subunit [Candidatus Parvarchaeum acidophilus ARMAN-5]
313 aa protein
accession:EFD93226.1
replication factor C small subunit
...
replication factor C small subunit [Methanothermobacter]
318 aa protein
accession:WP_048060778.1
replication factor C small subunit
...
replication factor C small subunit [Sulfolobus acidocaldarius]
325 aa protein
accession:WP_011277772.1
DOMAINS: and other(s) domains
...
DNA replication factor C complex subunit Rfc3 [Schizosaccharomyces pombe]
342 aa protein
accession:NP_001342879.1
replication factor C subunit 2 isoform X1 [Glycine max]
342 aa protein
accession:XP_003526646.1
ATPase family associated with various cellular activities (AAA) [Arabidopsis thaliana]
339 aa protein
accession:NP_564148.1
replication factor C small subunit [Candidatus Parvarchaeum acidophilus ARMAN-5]
313 aa protein
accession:EFD93226.1
replication factor C small subunit [Methanothermobacter]
318 aa protein
accession:WP_048060778.1
replication factor C small subunit [Sulfolobus acidocaldarius]
325 aa protein
accession:WP_011277772.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 261 | 261 | 97% | 8e-85 | 42.31% | WP_048060778.1 | |
| 2 | 260 | 260 | 98% | 2e-84 | 43.09% | WP_011277772.1 | |
| 3 | 213 | 213 | 95% | 7e-66 | 38.78% | XP_003526646.1 | |
| 4 | 211 | 211 | 95% | 3e-65 | 38.59% | NP_564148.1 | |
| 5 | 209 | 209 | 97% | 4e-64 | 35.83% | NP_001342879.1 |