Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: EHB04644.1 Transcription elongation factor B polypeptide 1 [Heterocephalus glaber] ... Query length: 170 aa

Elongin-C ...

Elongin-C [Caenorhabditis elegans]

124 aa protein

accession:NP_001380023.1

Alignment Sequence Identical proteins

elongin C, isoform B ...

elongin C, isoform B [Drosophila melanogaster]

117 aa protein

accession:NP_523794.1

Alignment Sequence Identical proteins

elongin C paralog b ...

elongin C paralog b [Danio rerio]

112 aa protein

accession:NP_001002440.2

Alignment Sequence Identical proteins

elongin-C isoform 1 ...

elongin-C isoform 1 [Mus musculus]

134 aa protein

accession:NP_001297399.1

Alignment Sequence Identical proteins

Query: Transcription elongation factor B polypeptide 1 ...

Transcription elongation factor B polypeptide 1 [Heterocephalus glaber]

170 aa protein

accession:EHB04644.1

Sequence Identical proteins

elongin-C isoform a ...

elongin-C isoform a [Homo sapiens]

112 aa protein

accession:NP_001191786.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001191786.1\|	elongin-C isoform a [Homo sapiens]	232	232	65%	1e-78	100.00%	NP_001191786.1
2 Select seq ref\|NP_001297399.1\|	elongin-C isoform 1 [Mus musculus]	233	233	65%	2e-78	99.11%	NP_001297399.1
3 Select seq ref\|NP_001002440.2\|	elongin C paralog b [Danio rerio]	230	230	65%	8e-78	99.10%	NP_001002440.2
4 Select seq ref\|NP_523794.1\|	elongin C, isoform B [Drosophila melanogaster]	216	216	63%	3e-72	93.52%	NP_523794.1
5 Select seq ref\|NP_001380023.1\|	Elongin-C [Caenorhabditis elegans]	180	180	64%	5e-58	75.45%	NP_001380023.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments