Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: ESK82516.1 reverse transcriptase-rnase h-integrase [Moniliophthora roreri MCA 2997] ... Query length: 860 aa

retrotransposable element/transposon Tf2-type ...

retrotransposable element/transposon Tf2-type [Schizosaccharomyces pombe]

1333 aa protein

accession:NP_001018276.1

Alignment Sequence Identical proteins

Query: reverse transcriptase-rnase h-integrase ...

reverse transcriptase-rnase h-integrase [Moniliophthora roreri MCA 2997]

860 aa protein

accession:ESK82516.1

Sequence Identical proteins

retrovirus-related Pol polyprotein from transposon opus [Danio rerio]

1737 aa protein

accession:XP_021323077.1

Alignment Sequence Identical proteins

hypothetical protein DDB_G0294236 ...

hypothetical protein DDB_G0294236 [Dictyostelium discoideum AX4]

1386 aa protein

accession:XP_628775.1

Alignment Sequence Identical proteins

uncharacterized protein LOC106795919 ...

uncharacterized protein LOC106795919 [Glycine max]

1373 aa protein

accession:XP_040865000.1

Alignment Sequence Identical proteins

gag-pol fusion protein ...

gag-pol fusion protein [Saccharomyces cerevisiae S288C]

1498 aa protein

accession:NP_012184.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001018276.1\|	retrotransposable element/transposon Tf2-type [Schizosaccharomyces pombe]	363	363	67%	6e-108	36.90%	NP_001018276.1
2 Select seq ref\|XP_040865000.1\|	uncharacterized protein LOC106795919 [Glycine max]	360	360	66%	2e-106	36.93%	XP_040865000.1
3 Select seq ref\|XP_021323077.1\|	retrovirus-related Pol polyprotein from transposon opus [Danio rerio]	280	280	45%	2e-78	41.67%	XP_021323077.1
4 Select seq ref\|NP_012184.1\|	gag-pol fusion protein [Saccharomyces cerevisiae S288C]	267	267	66%	8e-74	32.02%	NP_012184.1
5 Select seq ref\|XP_628775.1\|	hypothetical protein DDB_G0294236 [Dictyostelium discoideum AX4]	232	285	59%	3e-62	34.15%	XP_628775.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments