Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
F1QJF4.1
RecName: Full=Nuclear receptor ROR-alpha B; AltName: Full=Retinoid-related orphan receptor alpha 1; AltName: Full=Retinoid-related orphan receptor-alpha B [Danio rerio]
...
Query length:
474 aa
DOMAINS: and other(s) domains
...
hormone receptor 3, isoform F
...
hormone receptor 3, isoform F [Drosophila melanogaster]
487 aa protein
accession:NP_001246236.1
nuclear receptor ROR-alpha isoform d
...
nuclear receptor ROR-alpha isoform d [Homo sapiens]
468 aa protein
accession:NP_599024.1
nuclear receptor ROR-alpha isoform 2
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nuclear receptor ROR-alpha isoform 2 [Mus musculus]
467 aa protein
accession:NP_001276845.1
nuclear receptor ROR-alpha B isoform X2
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nuclear receptor ROR-alpha B isoform X2 [Danio rerio]
516 aa protein
accession:XP_021333206.1
Query: RecName: Full=Nuclear receptor ROR-alpha B; AltName: Full=Retinoid-related orphan receptor alpha 1; AltName: Full=Retinoid-related orphan receptor-alpha B
...
RecName: Full=Nuclear receptor ROR-alpha B; AltName: Full=Retinoid-related orphan receptor alpha 1; AltName: Full=Retinoid-related orphan receptor-alpha B [Danio rerio]
474 aa protein
accession:F1QJF4.1
nuclear receptor ROR-alpha B
...
nuclear receptor ROR-alpha B [Danio rerio]
474 aa protein
accession:NP_957361.1
DOMAINS: and other(s) domains
...
hormone receptor 3, isoform F [Drosophila melanogaster]
487 aa protein
accession:NP_001246236.1
nuclear receptor ROR-alpha isoform d [Homo sapiens]
468 aa protein
accession:NP_599024.1
nuclear receptor ROR-alpha isoform 2 [Mus musculus]
467 aa protein
accession:NP_001276845.1
nuclear receptor ROR-alpha B isoform X2 [Danio rerio]
516 aa protein
accession:XP_021333206.1
RecName: Full=Nuclear receptor ROR-alpha B; AltName: Full=Retinoid-related orphan receptor alpha 1; AltName: Full=Retinoid-related orphan receptor-alpha B [Danio rerio]
474 aa protein
accession:F1QJF4.1
nuclear receptor ROR-alpha B [Danio rerio]
474 aa protein
accession:NP_957361.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 978 | 978 | 100% | 0.0 | 99.37% | NP_957361.1 | |
| 2 | 719 | 719 | 98% | 0.0 | 72.49% | NP_599024.1 | |
| 3 | 718 | 718 | 98% | 0.0 | 72.49% | NP_001276845.1 | |
| 4 | 301 | 301 | 97% | 8e-96 | 37.97% | NP_001246236.1 | |
| 5 | 969 | 969 | 98% | 0.0 | 100.00% | XP_021333206.1 |