Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
HCS12993.1
TPA: GntR family transcriptional regulator [Zetaproteobacteria bacterium]
...
Query length:
293 aa
DOMAINS: and other(s) domains
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RNA-binding virulence regulatory protein CvfB
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RNA-binding virulence regulatory protein CvfB [Streptococcus]
284 aa protein
accession:WP_001095445.1
S1 RNA-binding domain-containing protein
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S1 RNA-binding domain-containing protein [Bacillales]
298 aa protein
accession:WP_010886474.1
S1-like domain-containing RNA-binding protein
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S1-like domain-containing RNA-binding protein [Clostridioides difficile]
280 aa protein
accession:WP_003437046.1
S1 RNA-binding domain-containing protein
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S1 RNA-binding domain-containing protein [Pseudomonas]
279 aa protein
accession:WP_003082250.1
Query: TPA: GntR family transcriptional regulator
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TPA: GntR family transcriptional regulator [Zetaproteobacteria bacterium]
293 aa protein
accession:HCS12993.1
S1-like domain-containing RNA-binding protein
...
S1-like domain-containing RNA-binding protein [Shewanella oneidensis]
279 aa protein
accession:WP_011071980.1
DOMAINS: and other(s) domains
...
RNA-binding virulence regulatory protein CvfB [Streptococcus]
284 aa protein
accession:WP_001095445.1
S1 RNA-binding domain-containing protein [Bacillales]
298 aa protein
accession:WP_010886474.1
S1-like domain-containing RNA-binding protein [Clostridioides difficile]
280 aa protein
accession:WP_003437046.1
S1 RNA-binding domain-containing protein [Pseudomonas]
279 aa protein
accession:WP_003082250.1
TPA: GntR family transcriptional regulator [Zetaproteobacteria bacterium]
293 aa protein
accession:HCS12993.1
S1-like domain-containing RNA-binding protein [Shewanella oneidensis]
279 aa protein
accession:WP_011071980.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 265 | 265 | 96% | 4e-87 | 43.46% | WP_011071980.1 | |
| 2 | 254 | 254 | 94% | 6e-83 | 47.50% | WP_003082250.1 | |
| 3 | 152 | 152 | 95% | 3e-43 | 34.62% | WP_003437046.1 | |
| 4 | 87.0 | 87.0 | 90% | 2e-18 | 26.71% | WP_010886474.1 | |
| 5 | 73.6 | 73.6 | 80% | 1e-13 | 26.32% | WP_001095445.1 |