Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: HIG51876.1 TPA: exosome complex exonuclease Rrp41 [Candidatus Pacearchaeota archaeon] ... Query length: 235 aa

Query: TPA: exosome complex exonuclease Rrp41 ...

TPA: exosome complex exonuclease Rrp41 [Candidatus Pacearchaeota archaeon]

235 aa protein

accession:HIG51876.1

Sequence Identical proteins

exosome complex exonuclease Rrp41 ...

exosome complex exonuclease Rrp41 [Methanothermobacter]

240 aa protein

accession:WP_010876322.1

Alignment Sequence Identical proteins

exosome complex component RRP41 homolog ...

exosome complex component RRP41 homolog [Glycine max]

241 aa protein

accession:XP_003549686.1

Alignment Sequence Identical proteins

3'-5'-exoribonuclease family protein ...

3'-5'-exoribonuclease family protein [Arabidopsis thaliana]

241 aa protein

accession:NP_001118878.1

Alignment Sequence Identical proteins

exosome complex component RRP41 ...

exosome complex component RRP41 [Danio rerio]

245 aa protein

accession:NP_957033.1

Alignment Sequence Identical proteins

exosome complex exonuclease Rrp41 ...

exosome complex exonuclease Rrp41 [Sulfolobus acidocaldarius]

243 aa protein

accession:WP_011277504.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_010876322.1\|	exosome complex exonuclease Rrp41 [Methanothermobacter]	200	200	95%	4e-63	44.20%	WP_010876322.1
2 Select seq ref\|WP_011277504.1\|	exosome complex exonuclease Rrp41 [Sulfolobus acidocaldarius]	194	194	94%	8e-61	46.64%	WP_011277504.1
3 Select seq ref\|XP_003549686.1\|	exosome complex component RRP41 homolog [Glycine max]	155	155	95%	1e-45	36.44%	XP_003549686.1
4 Select seq ref\|NP_001118878.1\|	3'-5'-exoribonuclease family protein [Arabidopsis thaliana]	150	150	95%	9e-44	35.56%	NP_001118878.1
5 Select seq ref\|NP_957033.1\|	exosome complex component RRP41 [Danio rerio]	127	127	95%	1e-34	31.58%	NP_957033.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments