Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: HMA86844.1 TPA: rhomboid family intramembrane serine protease [Desulfosalsimonadaceae bacterium] ... Query length: 290 aa

Query: TPA: rhomboid family intramembrane serine protease ...

TPA: rhomboid family intramembrane serine protease [Desulfosalsimonadaceae bacterium]

290 aa protein

accession:HMA86844.1

Sequence Identical proteins

inactive rhomboid protein 1-like ...

inactive rhomboid protein 1-like [Glycine max]

384 aa protein

accession:NP_001242137.1

Alignment Sequence Identical proteins

RHOMBOID-like 1 ...

RHOMBOID-like 1 [Arabidopsis thaliana]

389 aa protein

accession:NP_180469.3

Alignment Sequence Identical proteins

rhomboid family intramembrane serine protease ...

rhomboid family intramembrane serine protease [Thermotoga maritima]

235 aa protein

accession:WP_004081273.1

Alignment Sequence Identical proteins

rhomboid family intramembrane serine protease ...

rhomboid family intramembrane serine protease [Bacillales]

199 aa protein

accession:WP_003246687.1

Alignment Sequence Identical proteins

rhomboid family intramembrane serine protease ...

rhomboid family intramembrane serine protease [Streptomyces]

297 aa protein

accession:WP_003975079.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001242137.1\|	inactive rhomboid protein 1-like [Glycine max]	75.1	75.1	53%	5e-14	35.26%	NP_001242137.1
2 Select seq ref\|NP_180469.3\|	RHOMBOID-like 1 [Arabidopsis thaliana]	66.6	66.6	53%	5e-11	31.41%	NP_180469.3
3 Select seq ref\|WP_004081273.1\|	rhomboid family intramembrane serine protease [Thermotoga maritima]	59.3	59.3	51%	5e-09	31.37%	WP_004081273.1
4 Select seq ref\|WP_003246687.1\|	rhomboid family intramembrane serine protease [Bacillales]	57.4	57.4	53%	2e-08	29.56%	WP_003246687.1
5 Select seq ref\|WP_003975079.1\|	rhomboid family intramembrane serine protease [Streptomyces]	48.9	48.9	49%	2e-05	28.47%	WP_003975079.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments