Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
HSH09212.1
TPA: TRAM domain-containing protein [Oceanipulchritudo sp.]
...
Query length:
274 aa
DOMAINS: and other(s) domains
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Escherichia coli]
433 aa protein
accession:WP_000046824.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Synechocystis salina]
463 aa protein
accession:WP_194019499.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Bacillus]
459 aa protein
accession:WP_003233892.1
Query: TPA: TRAM domain-containing protein
...
TPA: TRAM domain-containing protein [Oceanipulchritudo sp.]
274 aa protein
accession:HSH09212.1
tRNA (uracil(54)-C(5))-methyltransferase
...
tRNA (uracil(54)-C(5))-methyltransferase [Schizosaccharomyces pombe]
477 aa protein
accession:NP_593067.2
tRNA (uracil(54)-C(5))-methyltransferase
...
tRNA (uracil(54)-C(5))-methyltransferase [Saccharomyces cerevisiae S288C]
639 aa protein
accession:NP_012982.2
DOMAINS: and other(s) domains
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Escherichia coli]
433 aa protein
accession:WP_000046824.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Synechocystis salina]
463 aa protein
accession:WP_194019499.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Bacillus]
459 aa protein
accession:WP_003233892.1
TPA: TRAM domain-containing protein [Oceanipulchritudo sp.]
274 aa protein
accession:HSH09212.1
tRNA (uracil(54)-C(5))-methyltransferase [Schizosaccharomyces pombe]
477 aa protein
accession:NP_593067.2
tRNA (uracil(54)-C(5))-methyltransferase [Saccharomyces cerevisiae S288C]
639 aa protein
accession:NP_012982.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 171 | 171 | 95% | 4e-49 | 35.31% | NP_593067.2 | |
| 2 | 130 | 130 | 97% | 8e-34 | 28.96% | WP_194019499.1 | |
| 3 | 127 | 127 | 93% | 8e-33 | 32.19% | WP_000046824.1 | |
| 4 | 127 | 127 | 95% | 1e-32 | 28.48% | WP_003233892.1 | |
| 5 | 122 | 122 | 96% | 2e-30 | 28.41% | NP_012982.2 |