Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
KAA6430071.1
RNA-binding family isoform 1 [Trebouxia sp. A1-2]
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Query length:
326 aa
DOMAINS: and other(s) domains
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RNA-binding region RNP-1 domain-containing protein
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RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
952 aa protein
accession:XP_639372.1
cleavage and polyadenylation specificity factor subunit 6 isoform X3
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cleavage and polyadenylation specificity factor subunit 6 isoform X3 [Danio rerio]
545 aa protein
accession:XP_005164510.1
cleavage and polyadenylation specificity factor subunit 6 isoform 2
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cleavage and polyadenylation specificity factor subunit 6 isoform 2 [Mus musculus]
551 aa protein
accession:NP_001013409.1
Query: RNA-binding family isoform 1
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RNA-binding family isoform 1 [Trebouxia sp. A1-2]
326 aa protein
accession:KAA6430071.1
RNA-binding (RRM/RBD/RNP motifs) family protein
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RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
573 aa protein
accession:NP_172778.1
cleavage and polyadenylation specificity factor subunit 6
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cleavage and polyadenylation specificity factor subunit 6 [Glycine max]
693 aa protein
accession:XP_003532176.1
DOMAINS: and other(s) domains
...
RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
952 aa protein
accession:XP_639372.1
cleavage and polyadenylation specificity factor subunit 6 isoform X3 [Danio rerio]
545 aa protein
accession:XP_005164510.1
cleavage and polyadenylation specificity factor subunit 6 isoform 2 [Mus musculus]
551 aa protein
accession:NP_001013409.1
RNA-binding family isoform 1 [Trebouxia sp. A1-2]
326 aa protein
accession:KAA6430071.1
RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]
573 aa protein
accession:NP_172778.1
cleavage and polyadenylation specificity factor subunit 6 [Glycine max]
693 aa protein
accession:XP_003532176.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 94.0 | 94.0 | 25% | 7e-20 | 47.56% | NP_172778.1 | |
| 2 | 90.1 | 90.1 | 23% | 2e-18 | 49.35% | XP_003532176.1 | |
| 3 | 83.6 | 83.6 | 28% | 3e-16 | 38.04% | XP_639372.1 | |
| 4 | 70.5 | 70.5 | 27% | 5e-12 | 37.89% | XP_005164510.1 | |
| 5 | 70.1 | 70.1 | 24% | 8e-12 | 41.98% | NP_001013409.1 |