Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
KAF5366981.1
hypothetical protein D9758_003967 [Tetrapyrgos nigripes]
...
Query length:
208 aa
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Danio rerio]
210 aa protein
accession:NP_001003564.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Mus musculus]
210 aa protein
accession:NP_079830.2
DNA-directed RNA polymerases I, II, and III subunit RPABC1
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Caenorhabditis elegans]
211 aa protein
accession:NP_491961.1
Query: hypothetical protein D9758_003967
...
hypothetical protein D9758_003967 [Tetrapyrgos nigripes]
208 aa protein
accession:KAF5366981.1
DNA-directed RNA polymerase subunit Rpb5
...
DNA-directed RNA polymerase subunit Rpb5 [Schizosaccharomyces pombe]
210 aa protein
accession:NP_593187.1
DNA-directed RNA polymerase core subunit RPB5
...
DNA-directed RNA polymerase core subunit RPB5 [Saccharomyces cerevisiae S288C]
215 aa protein
accession:NP_009712.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Danio rerio]
210 aa protein
accession:NP_001003564.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Mus musculus]
210 aa protein
accession:NP_079830.2
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Caenorhabditis elegans]
211 aa protein
accession:NP_491961.1
hypothetical protein D9758_003967 [Tetrapyrgos nigripes]
208 aa protein
accession:KAF5366981.1
DNA-directed RNA polymerase subunit Rpb5 [Schizosaccharomyces pombe]
210 aa protein
accession:NP_593187.1
DNA-directed RNA polymerase core subunit RPB5 [Saccharomyces cerevisiae S288C]
215 aa protein
accession:NP_009712.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 213 | 213 | 99% | 3e-69 | 49.04% | NP_001003564.1 | |
| 2 | 210 | 210 | 95% | 4e-68 | 50.00% | NP_593187.1 | |
| 3 | 209 | 209 | 96% | 2e-67 | 47.78% | NP_491961.1 | |
| 4 | 206 | 206 | 99% | 2e-66 | 46.63% | NP_079830.2 | |
| 5 | 205 | 205 | 96% | 6e-66 | 50.00% | NP_009712.1 |