Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
KAF6441902.1
RNA polymerase II subunit J [Rousettus aegyptiacus]
...
Query length:
152 aa
DOMAINS: and other(s) domains
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DNA-directed RNA polymerase I and III subunit Rpc19
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DNA-directed RNA polymerase I and III subunit Rpc19 [Schizosaccharomyces pombe]
125 aa protein
accession:NP_593118.2
Query: RNA polymerase II subunit J
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RNA polymerase II subunit J [Rousettus aegyptiacus]
152 aa protein
accession:KAF6441902.1
RNA polymerase II core subunit
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RNA polymerase II core subunit [Dictyostelium discoideum AX4]
120 aa protein
accession:XP_642530.2
DNA-directed RNA polymerases II, IV and V subunit 11 isoform X2
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DNA-directed RNA polymerases II, IV and V subunit 11 isoform X2 [Glycine max]
92 aa protein
accession:XP_040872543.1
DNA-directed RNA polymerase II subunit RPB11, putative
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DNA-directed RNA polymerase II subunit RPB11, putative [Plasmodium falciparum 3D7]
126 aa protein
accession:XP_001349775.1
DNA-directed RNA polymerase II core subunit RPB11
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DNA-directed RNA polymerase II core subunit RPB11 [Saccharomyces cerevisiae S288C]
120 aa protein
accession:NP_014638.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase I and III subunit Rpc19 [Schizosaccharomyces pombe]
125 aa protein
accession:NP_593118.2
RNA polymerase II subunit J [Rousettus aegyptiacus]
152 aa protein
accession:KAF6441902.1
RNA polymerase II core subunit [Dictyostelium discoideum AX4]
120 aa protein
accession:XP_642530.2
DNA-directed RNA polymerases II, IV and V subunit 11 isoform X2 [Glycine max]
92 aa protein
accession:XP_040872543.1
DNA-directed RNA polymerase II subunit RPB11, putative [Plasmodium falciparum 3D7]
126 aa protein
accession:XP_001349775.1
DNA-directed RNA polymerase II core subunit RPB11 [Saccharomyces cerevisiae S288C]
120 aa protein
accession:NP_014638.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 116 | 116 | 69% | 2e-33 | 50.48% | XP_642530.2 | |
| 2 | 115 | 115 | 70% | 3e-33 | 51.40% | NP_014638.1 | |
| 3 | 94.0 | 94.0 | 49% | 6e-25 | 54.67% | XP_040872543.1 | |
| 4 | 77.0 | 77.0 | 73% | 6e-18 | 35.71% | XP_001349775.1 | |
| 5 | 68.6 | 68.6 | 48% | 1e-14 | 41.10% | NP_593118.2 |