Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: KAG8450585.1 hypothetical protein GDO86_003016 [Hymenochirus boettgeri] ... Query length: 278 aa

Query: hypothetical protein GDO86_003016 ...

hypothetical protein GDO86_003016 [Hymenochirus boettgeri]

278 aa protein

accession:KAG8450585.1

Sequence Identical proteins

nuclear receptor subfamily 2 group C member 2 isoform 3 ...

nuclear receptor subfamily 2 group C member 2 isoform 3 [Mus musculus]

417 aa protein

accession:NP_001397412.1

Alignment Sequence Identical proteins

nuclear receptor subfamily 2 group C member 2 isoform X5 ...

nuclear receptor subfamily 2 group C member 2 isoform X5 [Homo sapiens]

615 aa protein

accession:XP_047304790.1

Alignment Sequence Identical proteins

retinoic acid receptor RXR-beta-B ...

retinoic acid receptor RXR-beta-B [Danio rerio]

422 aa protein

accession:NP_571313.1

Alignment Sequence Identical proteins

retinoic acid receptor RXR-beta isoform X1 ...

retinoic acid receptor RXR-beta isoform X1 [Rattus norvegicus]

625 aa protein

accession:XP_006256022.2

Alignment Sequence Identical proteins

hepatocyte nuclear factor 4, isoform F ...

hepatocyte nuclear factor 4, isoform F [Drosophila melanogaster]

666 aa protein

accession:NP_001285758.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001397412.1\|	nuclear receptor subfamily 2 group C member 2 isoform 3 [Mus musculus]	108	108	73%	5e-26	32.84%	NP_001397412.1
2 Select seq ref\|XP_047304790.1\|	nuclear receptor subfamily 2 group C member 2 isoform X5 [Homo sapiens]	109	109	74%	6e-26	32.69%	XP_047304790.1
3 Select seq ref\|NP_571313.1\|	retinoic acid receptor RXR-beta-B [Danio rerio]	95.9	95.9	74%	1e-21	29.81%	NP_571313.1
4 Select seq ref\|XP_006256022.2\|	retinoic acid receptor RXR-beta isoform X1 [Rattus norvegicus]	90.1	90.1	75%	2e-19	27.40%	XP_006256022.2
5 Select seq ref\|NP_001285758.1\|	hepatocyte nuclear factor 4, isoform F [Drosophila melanogaster]	76.3	76.3	74%	1e-14	26.44%	NP_001285758.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments