Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
KAI1709356.1
collagen triple helix repeat (20 copies) domain-containing protein [Ditylenchus destructor]
...
Query length:
303 aa
DOMAINS: and other(s) domains
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collagen alpha-5(VI) chain isoform 1 precursor
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collagen alpha-5(VI) chain isoform 1 precursor [Homo sapiens]
2614 aa protein
accession:NP_001265227.1
collagen alpha-3(VI) chain isoform X4
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collagen alpha-3(VI) chain isoform X4 [Danio rerio]
12736 aa protein
accession:XP_017213298.2
collagen alpha-1(IX) chain isoform 1 precursor
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collagen alpha-1(IX) chain isoform 1 precursor [Mus musculus]
921 aa protein
accession:NP_031766.3
Query: collagen triple helix repeat (20 copies) domain-containing protein
...
collagen triple helix repeat (20 copies) domain-containing protein [Ditylenchus destructor]
303 aa protein
accession:KAI1709356.1
Nematode cuticle collagen N-terminal domain-containing protein
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Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
359 aa protein
accession:NP_501655.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
452 aa protein
accession:NP_508873.1
DOMAINS: and other(s) domains
...
collagen alpha-5(VI) chain isoform 1 precursor [Homo sapiens]
2614 aa protein
accession:NP_001265227.1
collagen alpha-3(VI) chain isoform X4 [Danio rerio]
12736 aa protein
accession:XP_017213298.2
collagen alpha-1(IX) chain isoform 1 precursor [Mus musculus]
921 aa protein
accession:NP_031766.3
collagen triple helix repeat (20 copies) domain-containing protein [Ditylenchus destructor]
303 aa protein
accession:KAI1709356.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
359 aa protein
accession:NP_501655.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
452 aa protein
accession:NP_508873.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 144 | 144 | 81% | 4e-39 | 46.92% | NP_501655.1 | |
| 2 | 101 | 249 | 67% | 2e-22 | 34.32% | XP_017213298.2 | |
| 3 | 98.2 | 248 | 68% | 3e-21 | 34.12% | NP_001265227.1 | |
| 4 | 70.9 | 237 | 67% | 3e-12 | 39.00% | NP_031766.3 | |
| 5 | 127 | 127 | 79% | 2e-32 | 55.60% | NP_508873.1 |