Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: KDQ64340.1 hypothetical protein JAAARDRAFT_27965 [Jaapia argillacea MUCL 33604] ... Query length: 123 aa

Query: hypothetical protein JAAARDRAFT_27965 ...

hypothetical protein JAAARDRAFT_27965 [Jaapia argillacea MUCL 33604]

123 aa protein

accession:KDQ64340.1

Sequence Identical proteins

RNA-binding (RRM/RBD/RNP motifs) family protein ...

RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]

124 aa protein

accession:NP_196780.1

Alignment Sequence Identical proteins

splicing factor 3B subunit 6-like protein ...

splicing factor 3B subunit 6-like protein [Glycine max]

124 aa protein

accession:XP_003519509.1

Alignment Sequence Identical proteins

splicing factor 3b subunit 6 ...

splicing factor 3b subunit 6 [Drosophila melanogaster]

121 aa protein

accession:NP_648037.1

Alignment Sequence Identical proteins

splicing factor 3B subunit 6 ...

splicing factor 3B subunit 6 [Danio rerio]

125 aa protein

accession:NP_001002067.1

Alignment Sequence Identical proteins

splicing factor 3B subunit 6, putative ...

splicing factor 3B subunit 6, putative [Plasmodium falciparum 3D7]

106 aa protein

accession:XP_001350646.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_196780.1\|	RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]	135	135	96%	5e-41	48.74%	NP_196780.1
2 Select seq ref\|NP_648037.1\|	splicing factor 3b subunit 6 [Drosophila melanogaster]	134	134	96%	2e-40	49.58%	NP_648037.1
3 Select seq ref\|XP_003519509.1\|	splicing factor 3B subunit 6-like protein [Glycine max]	133	133	96%	4e-40	47.06%	XP_003519509.1
4 Select seq ref\|NP_001002067.1\|	splicing factor 3B subunit 6 [Danio rerio]	133	133	98%	5e-40	50.41%	NP_001002067.1
5 Select seq ref\|XP_001350646.1\|	splicing factor 3B subunit 6, putative [Plasmodium falciparum 3D7]	125	125	73%	5e-37	58.24%	XP_001350646.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments