Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
MDC0040802.1
beta-CASP ribonuclease aCPSF1 [Candidatus Poseidoniales archaeon]
...
Query length:
638 aa
DOMAINS: and other(s) domains
...
MBL fold metallo-hydrolase RNA specificity domain-containing protein
...
MBL fold metallo-hydrolase RNA specificity domain-containing protein [Shewanella oneidensis]
480 aa protein
accession:WP_011070880.1
MBL fold metallo-hydrolase RNA specificity domain-containing protein
...
MBL fold metallo-hydrolase RNA specificity domain-containing protein [Pseudomonas]
467 aa protein
accession:WP_003113875.1
MBL fold metallo-hydrolase RNA specificity domain-containing protein
...
MBL fold metallo-hydrolase RNA specificity domain-containing protein [Deinococcus radiodurans]
486 aa protein
accession:WP_034349847.1
Query: beta-CASP ribonuclease aCPSF1
...
beta-CASP ribonuclease aCPSF1 [Candidatus Poseidoniales archaeon]
638 aa protein
accession:MDC0040802.1
beta-CASP ribonuclease aCPSF1
...
beta-CASP ribonuclease aCPSF1 [Methanothermobacter]
636 aa protein
accession:WP_010876827.1
beta-CASP ribonuclease aCPSF1
...
beta-CASP ribonuclease aCPSF1 [Sulfolobus acidocaldarius]
631 aa protein
accession:WP_011277529.1
DOMAINS: and other(s) domains
...
MBL fold metallo-hydrolase RNA specificity domain-containing protein [Shewanella oneidensis]
480 aa protein
accession:WP_011070880.1
MBL fold metallo-hydrolase RNA specificity domain-containing protein [Pseudomonas]
467 aa protein
accession:WP_003113875.1
MBL fold metallo-hydrolase RNA specificity domain-containing protein [Deinococcus radiodurans]
486 aa protein
accession:WP_034349847.1
beta-CASP ribonuclease aCPSF1 [Candidatus Poseidoniales archaeon]
638 aa protein
accession:MDC0040802.1
beta-CASP ribonuclease aCPSF1 [Methanothermobacter]
636 aa protein
accession:WP_010876827.1
beta-CASP ribonuclease aCPSF1 [Sulfolobus acidocaldarius]
631 aa protein
accession:WP_011277529.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 555 | 555 | 99% | 0.0 | 43.33% | WP_010876827.1 | |
| 2 | 470 | 470 | 96% | 9e-158 | 37.74% | WP_011277529.1 | |
| 3 | 206 | 206 | 69% | 2e-58 | 31.41% | WP_003113875.1 | |
| 4 | 204 | 204 | 68% | 1e-57 | 33.41% | WP_034349847.1 | |
| 5 | 183 | 183 | 68% | 4e-50 | 28.98% | WP_011070880.1 |