Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001001231.1
guanine nucleotide-exchange factor SEC12 [Xenopus tropicalis]
...
Query length:
422 aa
DOMAINS: and other(s) domains
...
chromatin-silencing transcriptional regulator TUP1
...
chromatin-silencing transcriptional regulator TUP1 [Saccharomyces cerevisiae S288C]
713 aa protein
accession:NP_010007.1
katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2
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katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2 [Glycine max]
726 aa protein
accession:XP_025985089.2
U4/U6 small nuclear ribonucleoprotein Prp4
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U4/U6 small nuclear ribonucleoprotein Prp4 [Danio rerio]
507 aa protein
accession:NP_956049.1
WD40 repeat-containing protein
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WD40 repeat-containing protein [Dictyostelium discoideum AX4]
2430 aa protein
accession:XP_629304.1
Query: guanine nucleotide-exchange factor SEC12
...
guanine nucleotide-exchange factor SEC12 [Xenopus tropicalis]
422 aa protein
accession:NP_001001231.1
guanine nucleotide-exchange factor SEC12 isoform 3
...
guanine nucleotide-exchange factor SEC12 isoform 3 [Mus musculus]
370 aa protein
accession:NP_001409114.1
DOMAINS: and other(s) domains
...
chromatin-silencing transcriptional regulator TUP1 [Saccharomyces cerevisiae S288C]
713 aa protein
accession:NP_010007.1
katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2 [Glycine max]
726 aa protein
accession:XP_025985089.2
U4/U6 small nuclear ribonucleoprotein Prp4 [Danio rerio]
507 aa protein
accession:NP_956049.1
WD40 repeat-containing protein [Dictyostelium discoideum AX4]
2430 aa protein
accession:XP_629304.1
guanine nucleotide-exchange factor SEC12 [Xenopus tropicalis]
422 aa protein
accession:NP_001001231.1
guanine nucleotide-exchange factor SEC12 isoform 3 [Mus musculus]
370 aa protein
accession:NP_001409114.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 259 | 259 | 59% | 2e-82 | 53.75% | NP_001409114.1 | |
| 2 | 46.2 | 46.2 | 19% | 2e-04 | 30.95% | NP_010007.1 | |
| 3 | 46.2 | 46.2 | 14% | 3e-04 | 39.06% | XP_629304.1 | |
| 4 | 43.1 | 43.1 | 21% | 0.002 | 32.22% | NP_956049.1 | |
| 5 | 43.1 | 43.1 | 13% | 0.003 | 33.93% | XP_025985089.2 |