Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001001346.1 claudin-20 precursor [Homo sapiens] ... Query length: 219 aa

claudin-7 isoform 1 ...

claudin-7 isoform 1 [Homo sapiens]

211 aa protein

accession:NP_001171951.1

Alignment Sequence Identical proteins

claudin-14 ...

claudin-14 [Homo sapiens]

239 aa protein

accession:NP_001139549.1

Alignment Sequence Identical proteins

claudin-20 ...

claudin-20 [Danio rerio]

243 aa protein

accession:XP_005169938.1

Alignment Sequence Identical proteins

claudin-20 ...

claudin-20 [Danio rerio]

290 aa protein

accession:XP_005173866.1

Alignment Sequence Identical proteins

Query: claudin-20 precursor ...

claudin-20 precursor [Homo sapiens]

219 aa protein

accession:NP_001001346.1

Sequence Identical proteins

claudin-20 precursor ...

claudin-20 precursor [Mus musculus]

219 aa protein

accession:NP_001095030.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001095030.1\|	claudin-20 precursor [Mus musculus]	338	338	100%	4e-118	74.43%	NP_001095030.1
2 Select seq ref\|XP_005169938.1\|	claudin-20 [Danio rerio]	257	257	100%	6e-86	51.85%	XP_005169938.1
3 Select seq ref\|NP_001171951.1\|	claudin-7 isoform 1 [Homo sapiens]	160	160	94%	3e-48	39.71%	NP_001171951.1
4 Select seq ref\|XP_005173866.1\|	claudin-20 [Danio rerio]	236	236	99%	4e-77	50.45%	XP_005173866.1
5 Select seq ref\|NP_001139549.1\|	claudin-14 [Homo sapiens]	155	155	90%	4e-46	39.70%	NP_001139549.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments