Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001001523.1 nuclear receptor ROR-gamma isoform b [Homo sapiens] ... Query length: 497 aa

Nuclear hormone receptor family member nhr-23 ...

Nuclear hormone receptor family member nhr-23 [Caenorhabditis elegans]

553 aa protein

accession:NP_001367012.1

Alignment Sequence Identical proteins

hormone receptor 3, isoform I ...

hormone receptor 3, isoform I [Drosophila melanogaster]

871 aa protein

accession:NP_001334718.1

Alignment Sequence Identical proteins

Query: nuclear receptor ROR-gamma isoform b ...

nuclear receptor ROR-gamma isoform b [Homo sapiens]

497 aa protein

accession:NP_001001523.1

Sequence Identical proteins

nuclear receptor ROR-alpha A isoform X1 ...

nuclear receptor ROR-alpha A isoform X1 [Danio rerio]

519 aa protein

accession:XP_017209577.1

Alignment Sequence Identical proteins

nuclear receptor ROR-alpha isoform X4 ...

nuclear receptor ROR-alpha isoform X4 [Homo sapiens]

386 aa protein

accession:XP_047288884.1

Alignment Sequence Identical proteins

nuclear receptor ROR-beta isoform X1 ...

nuclear receptor ROR-beta isoform X1 [Mus musculus]

385 aa protein

accession:XP_036017445.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_017209577.1\|	nuclear receptor ROR-alpha A isoform X1 [Danio rerio]	465	465	98%	1e-159	52.04%	XP_017209577.1
2 Select seq ref\|XP_047288884.1\|	nuclear receptor ROR-alpha isoform X4 [Homo sapiens]	313	313	83%	5e-102	43.06%	XP_047288884.1
3 Select seq ref\|XP_036017445.1\|	nuclear receptor ROR-beta isoform X1 [Mus musculus]	296	296	83%	2e-95	41.13%	XP_036017445.1
4 Select seq ref\|NP_001334718.1\|	hormone receptor 3, isoform I [Drosophila melanogaster]	183	183	98%	4e-49	28.80%	NP_001334718.1
5 Select seq ref\|NP_001367012.1\|	Nuclear hormone receptor family member nhr-23 [Caenorhabditis elegans]	163	163	19%	3e-43	72.45%	NP_001367012.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments