Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001001720.1
vimentin-type intermediate filament-associated coiled-coil protein [Rattus norvegicus]
...
Query length:
171 aa
DOMAINS: and other(s) domains
...
vimentin-type intermediate filament-associated coiled-coil protein
...
vimentin-type intermediate filament-associated coiled-coil protein [Danio rerio]
181 aa protein
accession:XP_021335379.1
vimentin-type intermediate filament-associated coiled-coil protein
...
vimentin-type intermediate filament-associated coiled-coil protein [Homo sapiens]
169 aa protein
accession:NP_001017921.1
vimentin-type intermediate filament-associated coiled-coil protein isoform 1
...
vimentin-type intermediate filament-associated coiled-coil protein isoform 1 [Mus musculus]
174 aa protein
accession:NP_849257.1
vimentin-type intermediate filament-associated coiled-coil protein isoform X1
...
vimentin-type intermediate filament-associated coiled-coil protein isoform X1 [Rattus norvegicus]
203 aa protein
accession:XP_008764987.3
Query: vimentin-type intermediate filament-associated coiled-coil protein
...
vimentin-type intermediate filament-associated coiled-coil protein [Rattus norvegicus]
171 aa protein
accession:NP_001001720.1
vimentin-type intermediate filament-associated coiled-coil protein isoform X2
...
vimentin-type intermediate filament-associated coiled-coil protein isoform X2 [Rattus norvegicus]
190 aa protein
accession:XP_008764988.1
DOMAINS: and other(s) domains
...
vimentin-type intermediate filament-associated coiled-coil protein [Danio rerio]
181 aa protein
accession:XP_021335379.1
vimentin-type intermediate filament-associated coiled-coil protein [Homo sapiens]
169 aa protein
accession:NP_001017921.1
vimentin-type intermediate filament-associated coiled-coil protein isoform 1 [Mus musculus]
174 aa protein
accession:NP_849257.1
vimentin-type intermediate filament-associated coiled-coil protein isoform X1 [Rattus norvegicus]
203 aa protein
accession:XP_008764987.3
vimentin-type intermediate filament-associated coiled-coil protein [Rattus norvegicus]
171 aa protein
accession:NP_001001720.1
vimentin-type intermediate filament-associated coiled-coil protein isoform X2 [Rattus norvegicus]
190 aa protein
accession:XP_008764988.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 318 | 318 | 97% | 3e-111 | 98.80% | XP_008764987.3 | |
| 2 | 285 | 285 | 100% | 1e-98 | 90.23% | NP_849257.1 | |
| 3 | 213 | 213 | 100% | 3e-70 | 74.85% | NP_001017921.1 | |
| 4 | 144 | 144 | 100% | 4e-43 | 46.49% | XP_021335379.1 | |
| 5 | 214 | 214 | 63% | 3e-70 | 99.08% | XP_008764988.1 |