Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001002727.1 probable E3 ubiquitin-protein ligase RNF144A-B [Danio rerio] ... Query length: 293 aa

uncharacterized protein Dmel_CG33144, isoform B ...

uncharacterized protein Dmel_CG33144, isoform B [Drosophila melanogaster]

1102 aa protein

accession:NP_001188904.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF144B ...

E3 ubiquitin-protein ligase RNF144B [Homo sapiens]

303 aa protein

accession:NP_877434.2

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF144B ...

E3 ubiquitin-protein ligase RNF144B [Rattus norvegicus]

301 aa protein

accession:NP_001102351.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase RNF144A isoform 1 ...

E3 ubiquitin-protein ligase RNF144A isoform 1 [Mus musculus]

292 aa protein

accession:NP_001075446.1

Alignment Sequence Identical proteins

Query: probable E3 ubiquitin-protein ligase RNF144A-B ...

probable E3 ubiquitin-protein ligase RNF144A-B [Danio rerio]

293 aa protein

accession:NP_001002727.1

Sequence Identical proteins

probable E3 ubiquitin-protein ligase RNF144A-B isoform X1 ...

probable E3 ubiquitin-protein ligase RNF144A-B isoform X1 [Danio rerio]

294 aa protein

accession:XP_005160733.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_005160733.1\|	probable E3 ubiquitin-protein ligase RNF144A-B isoform X1 [Danio rerio]	592	592	100%	0.0	99.32%	XP_005160733.1
2 Select seq ref\|NP_001075446.1\|	E3 ubiquitin-protein ligase RNF144A isoform 1 [Mus musculus]	501	501	100%	3e-180	81.57%	NP_001075446.1
3 Select seq ref\|NP_877434.2\|	E3 ubiquitin-protein ligase RNF144B [Homo sapiens]	322	322	97%	2e-109	56.29%	NP_877434.2
4 Select seq ref\|NP_001102351.1\|	E3 ubiquitin-protein ligase RNF144B [Rattus norvegicus]	314	314	96%	4e-106	54.23%	NP_001102351.1
5 Select seq ref\|NP_001188904.1\|	uncharacterized protein Dmel_CG33144, isoform B [Drosophila melanogaster]	226	226	96%	5e-66	42.55%	NP_001188904.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments