Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001002870.2
transcription intermediary factor 1-alpha [Danio rerio]
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Query length:
961 aa
DOMAINS: and other(s) domains
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Query: transcription intermediary factor 1-alpha
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transcription intermediary factor 1-alpha [Danio rerio]
961 aa protein
accession:NP_001002870.2
transcription intermediary factor 1-alpha isoform b
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transcription intermediary factor 1-alpha isoform b [Homo sapiens]
1016 aa protein
accession:NP_003843.3
transcription intermediary factor 1-alpha isoform 2
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transcription intermediary factor 1-alpha isoform 2 [Mus musculus]
1017 aa protein
accession:NP_001258993.1
E3 ubiquitin-protein ligase TRIM33 isoform X1
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E3 ubiquitin-protein ligase TRIM33 isoform X1 [Rattus norvegicus]
1127 aa protein
accession:XP_006233162.1
E3 ubiquitin-protein ligase TRIM33 isoform X5
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E3 ubiquitin-protein ligase TRIM33 isoform X5 [Homo sapiens]
638 aa protein
accession:XP_016856943.1
E3 ubiquitin-protein ligase TRIM33 isoform X1
...
E3 ubiquitin-protein ligase TRIM33 isoform X1 [Danio rerio]
1159 aa protein
accession:XP_005166785.1
DOMAINS: and other(s) domains
...
transcription intermediary factor 1-alpha [Danio rerio]
961 aa protein
accession:NP_001002870.2
transcription intermediary factor 1-alpha isoform b [Homo sapiens]
1016 aa protein
accession:NP_003843.3
transcription intermediary factor 1-alpha isoform 2 [Mus musculus]
1017 aa protein
accession:NP_001258993.1
E3 ubiquitin-protein ligase TRIM33 isoform X1 [Rattus norvegicus]
1127 aa protein
accession:XP_006233162.1
E3 ubiquitin-protein ligase TRIM33 isoform X5 [Homo sapiens]
638 aa protein
accession:XP_016856943.1
E3 ubiquitin-protein ligase TRIM33 isoform X1 [Danio rerio]
1159 aa protein
accession:XP_005166785.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 433 | 433 | 44% | 2e-134 | 49.22% | NP_003843.3 | |
| 2 | 431 | 431 | 48% | 5e-134 | 46.92% | NP_001258993.1 | |
| 3 | 410 | 651 | 60% | 5e-125 | 50.49% | XP_006233162.1 | |
| 4 | 374 | 623 | 66% | 2e-111 | 46.93% | XP_005166785.1 | |
| 5 | 408 | 408 | 36% | 1e-129 | 53.99% | XP_016856943.1 |