Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001005739.1
vacuolar protein sorting-associated protein 54 isoform 2 [Homo sapiens]
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Query length:
965 aa
DOMAINS: and other(s) domains
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Vacuolar protein sorting-associated protein 54
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Vacuolar protein sorting-associated protein 54 [Caenorhabditis elegans]
749 aa protein
accession:NP_001256227.1
scattered
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scattered [Drosophila melanogaster]
940 aa protein
accession:NP_524905.1
vacuolar protein sorting-associated protein 54
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vacuolar protein sorting-associated protein 54 [Danio rerio]
998 aa protein
accession:NP_001124248.1
vacuolar protein sorting-associated protein 54 isoform 2
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vacuolar protein sorting-associated protein 54 isoform 2 [Mus musculus]
965 aa protein
accession:NP_001277557.1
Query: vacuolar protein sorting-associated protein 54 isoform 2
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vacuolar protein sorting-associated protein 54 isoform 2 [Homo sapiens]
965 aa protein
accession:NP_001005739.1
vacuolar protein sorting-associated protein 54 isoform 1
...
vacuolar protein sorting-associated protein 54 isoform 1 [Homo sapiens]
977 aa protein
accession:NP_057600.2
DOMAINS: and other(s) domains
...
Vacuolar protein sorting-associated protein 54 [Caenorhabditis elegans]
749 aa protein
accession:NP_001256227.1
scattered [Drosophila melanogaster]
940 aa protein
accession:NP_524905.1
vacuolar protein sorting-associated protein 54 [Danio rerio]
998 aa protein
accession:NP_001124248.1
vacuolar protein sorting-associated protein 54 isoform 2 [Mus musculus]
965 aa protein
accession:NP_001277557.1
vacuolar protein sorting-associated protein 54 isoform 2 [Homo sapiens]
965 aa protein
accession:NP_001005739.1
vacuolar protein sorting-associated protein 54 isoform 1 [Homo sapiens]
977 aa protein
accession:NP_057600.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1989 | 1989 | 100% | 0.0 | 98.77% | NP_057600.2 | |
| 2 | 1859 | 1859 | 100% | 0.0 | 92.75% | NP_001277557.1 | |
| 3 | 1362 | 1362 | 100% | 0.0 | 66.33% | NP_001124248.1 | |
| 4 | 295 | 564 | 80% | 3e-84 | 39.29% | NP_524905.1 | |
| 5 | 217 | 217 | 32% | 4e-58 | 31.93% | NP_001256227.1 |