Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001007308.1
pre-mRNA cleavage complex 2 protein Pcf11 [Danio rerio]
...
Query length:
1457 aa
DOMAINS: and other(s) domains
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Polyadenylation and cleavage factor homolog 11
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Polyadenylation and cleavage factor homolog 11 [Caenorhabditis elegans]
823 aa protein
accession:NP_498068.1
Pcf11 cleavage and polyadenylation factor subunit, isoform B
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Pcf11 cleavage and polyadenylation factor subunit, isoform B [Drosophila melanogaster]
573 aa protein
accession:NP_001163153.1
Query: pre-mRNA cleavage complex 2 protein Pcf11
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pre-mRNA cleavage complex 2 protein Pcf11 [Danio rerio]
1457 aa protein
accession:NP_001007308.1
pre-mRNA cleavage complex 2 protein Pcf11
...
pre-mRNA cleavage complex 2 protein Pcf11 [Mus musculus]
1553 aa protein
accession:NP_083354.3
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
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pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 [Homo sapiens]
1438 aa protein
accession:XP_047283076.1
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
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pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 [Rattus norvegicus]
1867 aa protein
accession:XP_008757879.2
DOMAINS: and other(s) domains
...
Polyadenylation and cleavage factor homolog 11 [Caenorhabditis elegans]
823 aa protein
accession:NP_498068.1
Pcf11 cleavage and polyadenylation factor subunit, isoform B [Drosophila melanogaster]
573 aa protein
accession:NP_001163153.1
pre-mRNA cleavage complex 2 protein Pcf11 [Danio rerio]
1457 aa protein
accession:NP_001007308.1
pre-mRNA cleavage complex 2 protein Pcf11 [Mus musculus]
1553 aa protein
accession:NP_083354.3
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 [Homo sapiens]
1438 aa protein
accession:XP_047283076.1
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 [Rattus norvegicus]
1867 aa protein
accession:XP_008757879.2
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Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 872 | 872 | 97% | 0.0 | 43.15% | NP_083354.3 | |
| 2 | 559 | 559 | 81% | 1e-172 | 37.95% | XP_047283076.1 | |
| 3 | 556 | 952 | 97% | 2e-168 | 39.23% | XP_008757879.2 | |
| 4 | 181 | 181 | 13% | 1e-46 | 47.87% | NP_001163153.1 | |
| 5 | 113 | 203 | 24% | 6e-24 | 33.51% | NP_498068.1 |