Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001007554.1
cold shock domain-containing protein E1 isoform 1 [Homo sapiens]
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Query length:
798 aa
DOMAINS: and other(s) domains
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transcription antiterminator/RNA stability regulator CspE
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transcription antiterminator/RNA stability regulator CspE [Bacteria]
69 aa protein
accession:WP_001062678.1
upstream of N-ras, isoform C
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upstream of N-ras, isoform C [Drosophila melanogaster]
1032 aa protein
accession:NP_001246669.1
cold shock domain-containing protein E1
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cold shock domain-containing protein E1 [Danio rerio]
798 aa protein
accession:NP_001186365.1
cold shock domain-containing protein E1 isoform X1
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cold shock domain-containing protein E1 isoform X1 [Mus musculus]
844 aa protein
accession:XP_006501460.1
Query: cold shock domain-containing protein E1 isoform 1
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cold shock domain-containing protein E1 isoform 1 [Homo sapiens]
798 aa protein
accession:NP_001007554.1
cold shock domain-containing protein E1 isoform 4
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cold shock domain-containing protein E1 isoform 4 [Homo sapiens]
844 aa protein
accession:NP_001229820.1
DOMAINS: and other(s) domains
...
transcription antiterminator/RNA stability regulator CspE [Bacteria]
69 aa protein
accession:WP_001062678.1
upstream of N-ras, isoform C [Drosophila melanogaster]
1032 aa protein
accession:NP_001246669.1
cold shock domain-containing protein E1 [Danio rerio]
798 aa protein
accession:NP_001186365.1
cold shock domain-containing protein E1 isoform X1 [Mus musculus]
844 aa protein
accession:XP_006501460.1
cold shock domain-containing protein E1 isoform 1 [Homo sapiens]
798 aa protein
accession:NP_001007554.1
cold shock domain-containing protein E1 isoform 4 [Homo sapiens]
844 aa protein
accession:NP_001229820.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1650 | 1650 | 100% | 0.0 | 100.00% | NP_001229820.1 | |
| 2 | 1629 | 1629 | 100% | 0.0 | 98.50% | XP_006501460.1 | |
| 3 | 1295 | 1295 | 100% | 0.0 | 77.90% | NP_001186365.1 | |
| 4 | 419 | 1209 | 96% | 3e-131 | 48.78% | NP_001246669.1 | |
| 5 | 40.0 | 40.0 | 8% | 0.005 | 35.29% | WP_001062678.1 |