Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001008827.1
RT1 class Ia, locus A1 precursor [Rattus norvegicus]
...
Query length:
369 aa
DOMAINS: and other(s) domains
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HLA class I histocompatibility antigen, A alpha chain isoform X1
...
HLA class I histocompatibility antigen, A alpha chain isoform X1 [Homo sapiens]
362 aa protein
accession:XP_041536701.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor
...
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor [Mus musculus]
374 aa protein
accession:NP_001390292.1
RT1 class Ia, locus A1 isoform X4
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RT1 class Ia, locus A1 isoform X4 [Rattus norvegicus]
358 aa protein
accession:XP_063135034.1
RT1 class Ia, locus A1 isoform X3
...
RT1 class Ia, locus A1 isoform X3 [Rattus norvegicus]
374 aa protein
accession:XP_063135033.1
Query: RT1 class Ia, locus A1 precursor
...
RT1 class Ia, locus A1 precursor [Rattus norvegicus]
369 aa protein
accession:NP_001008827.1
RT1 class Ia, locus A1 isoform X1
...
RT1 class Ia, locus A1 isoform X1 [Rattus norvegicus]
387 aa protein
accession:XP_063135032.1
DOMAINS: and other(s) domains
...
HLA class I histocompatibility antigen, A alpha chain isoform X1 [Homo sapiens]
362 aa protein
accession:XP_041536701.1
H-2 class I histocompatibility antigen, K-W28 alpha chain isoform 4 precursor [Mus musculus]
374 aa protein
accession:NP_001390292.1
RT1 class Ia, locus A1 isoform X4 [Rattus norvegicus]
358 aa protein
accession:XP_063135034.1
RT1 class Ia, locus A1 isoform X3 [Rattus norvegicus]
374 aa protein
accession:XP_063135033.1
RT1 class Ia, locus A1 precursor [Rattus norvegicus]
369 aa protein
accession:NP_001008827.1
RT1 class Ia, locus A1 isoform X1 [Rattus norvegicus]
387 aa protein
accession:XP_063135032.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 754 | 754 | 100% | 0.0 | 98.66% | XP_063135033.1 | |
| 2 | 541 | 541 | 98% | 0.0 | 76.08% | NP_001390292.1 | |
| 3 | 490 | 490 | 98% | 8e-174 | 65.57% | XP_041536701.1 | |
| 4 | 752 | 752 | 100% | 0.0 | 98.40% | XP_063135032.1 | |
| 5 | 719 | 719 | 95% | 0.0 | 98.32% | XP_063135034.1 |