Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001014035.1 U6 snRNA phosphodiesterase 1 [Rattus norvegicus] ... Query length: 267 aa

U6 snRNA phosphodiesterase-like protein ...

U6 snRNA phosphodiesterase-like protein [Arabidopsis thaliana]

257 aa protein

accession:NP_001331242.1

Alignment Sequence Identical proteins

U6 snRNA phosphodiesterase isoform X1 ...

U6 snRNA phosphodiesterase isoform X1 [Danio rerio]

278 aa protein

accession:XP_009296173.1

Alignment Sequence Identical proteins

uncharacterized protein Dmel_CG16790, isoform A ...

uncharacterized protein Dmel_CG16790, isoform A [Drosophila melanogaster]

258 aa protein

accession:NP_649911.1

Alignment Sequence Identical proteins

U6 snRNA phosphodiesterase 1 isoform 1 ...

U6 snRNA phosphodiesterase 1 isoform 1 [Homo sapiens]

265 aa protein

accession:NP_078874.2

Alignment Sequence Identical proteins

Query: U6 snRNA phosphodiesterase 1 ...

U6 snRNA phosphodiesterase 1 [Rattus norvegicus]

267 aa protein

accession:NP_001014035.1

Sequence Identical proteins

U6 snRNA phosphodiesterase 1 isoform 1 ...

U6 snRNA phosphodiesterase 1 isoform 1 [Mus musculus]

267 aa protein

accession:NP_598715.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_598715.2\|	U6 snRNA phosphodiesterase 1 isoform 1 [Mus musculus]	520	520	100%	0.0	91.76%	NP_598715.2
2 Select seq ref\|NP_078874.2\|	U6 snRNA phosphodiesterase 1 isoform 1 [Homo sapiens]	447	447	100%	1e-159	82.77%	NP_078874.2
3 Select seq ref\|XP_009296173.1\|	U6 snRNA phosphodiesterase isoform X1 [Danio rerio]	248	248	89%	6e-81	47.70%	XP_009296173.1
4 Select seq ref\|NP_649911.1\|	uncharacterized protein Dmel_CG16790, isoform A [Drosophila melanogaster]	137	137	76%	4e-38	40.00%	NP_649911.1
5 Select seq ref\|NP_001331242.1\|	U6 snRNA phosphodiesterase-like protein [Arabidopsis thaliana]	109	109	73%	2e-27	32.65%	NP_001331242.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments