Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001014277.1 gamma-secretase subunit APH-1A [Rattus norvegicus] ... Query length: 247 aa

gamma-secretase subunit APH1-like protein ...

gamma-secretase subunit APH1-like protein [Arabidopsis thaliana]

250 aa protein

accession:NP_001325103.1

Alignment Sequence Identical proteins

gamma-secretase subunit APH1-like isoform X3 ...

gamma-secretase subunit APH1-like isoform X3 [Glycine max]

207 aa protein

accession:XP_040862646.1

Alignment Sequence Identical proteins

similar to anterior pharynx defective 1b homolog isoform X1 [Rattus norvegicus]

262 aa protein

accession:XP_063122263.1

Alignment Sequence Identical proteins

putative gamma-secretase subunit APH-1C isoform 2 ...

putative gamma-secretase subunit APH-1C isoform 2 [Mus musculus]

208 aa protein

accession:NP_001397423.1

Alignment Sequence Identical proteins

Query: gamma-secretase subunit APH-1A ...

gamma-secretase subunit APH-1A [Rattus norvegicus]

247 aa protein

accession:NP_001014277.1

Sequence Identical proteins

gamma-secretase subunit Aph-1b ...

gamma-secretase subunit Aph-1b [Danio rerio]

258 aa protein

accession:NP_956409.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_956409.1\|	gamma-secretase subunit Aph-1b [Danio rerio]	328	328	100%	2e-113	65.18%	NP_956409.1
2 Select seq ref\|XP_063122263.1\|	similar to anterior pharynx defective 1b homolog isoform X1 [Rattus norvegicus]	236	236	87%	3e-77	56.22%	XP_063122263.1
3 Select seq ref\|NP_001397423.1\|	putative gamma-secretase subunit APH-1C isoform 2 [Mus musculus]	216	216	78%	5e-70	54.87%	NP_001397423.1
4 Select seq ref\|NP_001325103.1\|	gamma-secretase subunit APH1-like protein [Arabidopsis thaliana]	75.5	75.5	83%	3e-15	27.83%	NP_001325103.1
5 Select seq ref\|XP_040862646.1\|	gamma-secretase subunit APH1-like isoform X3 [Glycine max]	71.2	71.2	72%	5e-14	28.11%	XP_040862646.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments