Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001018540.1
DNA-directed RNA polymerase I subunit RPA49 [Danio rerio]
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Query length:
413 aa
DOMAINS: and other(s) domains
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Query: DNA-directed RNA polymerase I subunit RPA49
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DNA-directed RNA polymerase I subunit RPA49 [Danio rerio]
413 aa protein
accession:NP_001018540.1
DNA-directed RNA polymerase I subunit RPA49 isoform b
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DNA-directed RNA polymerase I subunit RPA49 isoform b [Mus musculus]
434 aa protein
accession:NP_073722.1
DNA-directed RNA polymerase I subunit RPA49 isoform a
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DNA-directed RNA polymerase I subunit RPA49 isoform a [Mus musculus]
482 aa protein
accession:NP_001272729.1
DNA-directed RNA polymerase I subunit RPA49
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DNA-directed RNA polymerase I subunit RPA49 [Rattus norvegicus]
434 aa protein
accession:NP_001101408.1
DNA-directed RNA polymerase I subunit RPA49 isoform 1
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DNA-directed RNA polymerase I subunit RPA49 isoform 1 [Homo sapiens]
419 aa protein
accession:NP_071935.1
DNA-directed RNA polymerase I subunit RPA49 isoform X1
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DNA-directed RNA polymerase I subunit RPA49 isoform X1 [Homo sapiens]
481 aa protein
accession:XP_047279685.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerase I subunit RPA49 [Danio rerio]
413 aa protein
accession:NP_001018540.1
DNA-directed RNA polymerase I subunit RPA49 isoform b [Mus musculus]
434 aa protein
accession:NP_073722.1
DNA-directed RNA polymerase I subunit RPA49 isoform a [Mus musculus]
482 aa protein
accession:NP_001272729.1
DNA-directed RNA polymerase I subunit RPA49 [Rattus norvegicus]
434 aa protein
accession:NP_001101408.1
DNA-directed RNA polymerase I subunit RPA49 isoform 1 [Homo sapiens]
419 aa protein
accession:NP_071935.1
DNA-directed RNA polymerase I subunit RPA49 isoform X1 [Homo sapiens]
481 aa protein
accession:XP_047279685.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 352 | 352 | 99% | 4e-117 | 43.27% | NP_073722.1 | |
| 2 | 344 | 344 | 97% | 1e-114 | 42.58% | NP_071935.1 | |
| 3 | 344 | 344 | 98% | 3e-114 | 42.13% | NP_001101408.1 | |
| 4 | 340 | 340 | 94% | 4e-112 | 43.36% | XP_047279685.1 | |
| 5 | 333 | 333 | 99% | 2e-109 | 39.22% | NP_001272729.1 |