Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001020069.1
RNA polymerase II-associated factor 1 homolog [Rattus norvegicus]
...
Query length:
535 aa
DOMAINS: and other(s) domains
...
antimeros, isoform B
...
antimeros, isoform B [Drosophila melanogaster]
538 aa protein
accession:NP_001262263.1
RNA polymerase II-associated factor 1 homolog
...
RNA polymerase II-associated factor 1 homolog [Danio rerio]
503 aa protein
accession:NP_001019624.1
RNA polymerase II-associated factor 1 homolog isoform 1
...
RNA polymerase II-associated factor 1 homolog isoform 1 [Homo sapiens]
531 aa protein
accession:NP_061961.2
RNA polymerase II-associated factor 1 homolog
...
RNA polymerase II-associated factor 1 homolog [Mus musculus]
535 aa protein
accession:NP_062331.2
Query: RNA polymerase II-associated factor 1 homolog
...
RNA polymerase II-associated factor 1 homolog [Rattus norvegicus]
535 aa protein
accession:NP_001020069.1
RNA polymerase II-associated factor 1 homolog isoform X1
...
RNA polymerase II-associated factor 1 homolog isoform X1 [Rattus norvegicus]
560 aa protein
accession:XP_063122479.1
DOMAINS: and other(s) domains
...
antimeros, isoform B [Drosophila melanogaster]
538 aa protein
accession:NP_001262263.1
RNA polymerase II-associated factor 1 homolog [Danio rerio]
503 aa protein
accession:NP_001019624.1
RNA polymerase II-associated factor 1 homolog isoform 1 [Homo sapiens]
531 aa protein
accession:NP_061961.2
RNA polymerase II-associated factor 1 homolog [Mus musculus]
535 aa protein
accession:NP_062331.2
RNA polymerase II-associated factor 1 homolog [Rattus norvegicus]
535 aa protein
accession:NP_001020069.1
RNA polymerase II-associated factor 1 homolog isoform X1 [Rattus norvegicus]
560 aa protein
accession:XP_063122479.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1093 | 1093 | 100% | 0.0 | 99.63% | NP_062331.2 | |
| 2 | 1083 | 1083 | 100% | 0.0 | 95.54% | XP_063122479.1 | |
| 3 | 1067 | 1067 | 100% | 0.0 | 97.76% | NP_061961.2 | |
| 4 | 737 | 737 | 94% | 0.0 | 75.05% | NP_001019624.1 | |
| 5 | 430 | 430 | 69% | 2e-144 | 59.52% | NP_001262263.1 |