Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001020329.1
HLA class II histocompatibility antigen gamma chain isoform c [Homo sapiens]
...
Query length:
160 aa
DOMAINS: and other(s) domains
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CD74 molecule, major histocompatibility complex, class II invariant chain a
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CD74 molecule, major histocompatibility complex, class II invariant chain a [Danio rerio]
237 aa protein
accession:NP_571665.1
H-2 class II histocompatibility antigen gamma chain isoform 2
...
H-2 class II histocompatibility antigen gamma chain isoform 2 [Mus musculus]
215 aa protein
accession:NP_034675.1
HLA class II histocompatibility antigen gamma chain isoform a
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HLA class II histocompatibility antigen gamma chain isoform a [Homo sapiens]
296 aa protein
accession:NP_001020330.1
HLA class II histocompatibility antigen gamma chain isoform b
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HLA class II histocompatibility antigen gamma chain isoform b [Homo sapiens]
232 aa protein
accession:NP_004346.1
Query: HLA class II histocompatibility antigen gamma chain isoform c
...
HLA class II histocompatibility antigen gamma chain isoform c [Homo sapiens]
160 aa protein
accession:NP_001020329.1
HLA class II histocompatibility antigen gamma chain isoform e
...
HLA class II histocompatibility antigen gamma chain isoform e [Homo sapiens]
192 aa protein
accession:NP_001351013.1
DOMAINS: and other(s) domains
...
CD74 molecule, major histocompatibility complex, class II invariant chain a [Danio rerio]
237 aa protein
accession:NP_571665.1
H-2 class II histocompatibility antigen gamma chain isoform 2 [Mus musculus]
215 aa protein
accession:NP_034675.1
HLA class II histocompatibility antigen gamma chain isoform a [Homo sapiens]
296 aa protein
accession:NP_001020330.1
HLA class II histocompatibility antigen gamma chain isoform b [Homo sapiens]
232 aa protein
accession:NP_004346.1
HLA class II histocompatibility antigen gamma chain isoform c [Homo sapiens]
160 aa protein
accession:NP_001020329.1
HLA class II histocompatibility antigen gamma chain isoform e [Homo sapiens]
192 aa protein
accession:NP_001351013.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 314 | 314 | 100% | 5e-110 | 83.33% | NP_001351013.1 | |
| 2 | 205 | 205 | 81% | 1e-66 | 78.46% | NP_034675.1 | |
| 3 | 44.3 | 44.3 | 58% | 1e-04 | 33.33% | NP_571665.1 | |
| 4 | 300 | 300 | 92% | 6e-104 | 99.32% | NP_004346.1 | |
| 5 | 298 | 298 | 92% | 2e-102 | 99.32% | NP_001020330.1 |