Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001020866.1 COP9 signalosome complex subunit 5 [Rattus norvegicus] ... Query length: 334 aa

metallopeptidase, putative ...

metallopeptidase, putative [Leishmania donovani]

473 aa protein

accession:XP_003859772.1

Alignment Sequence Identical proteins

Query: COP9 signalosome complex subunit 5 ...

COP9 signalosome complex subunit 5 [Rattus norvegicus]

334 aa protein

accession:NP_001020866.1

Sequence Identical proteins

COP9 signalosome complex subunit 5a isoform X1 ...

COP9 signalosome complex subunit 5a isoform X1 [Glycine max]

409 aa protein

accession:XP_040872266.1

Alignment Sequence Identical proteins

COP9-signalosome 5B ...

COP9-signalosome 5B [Arabidopsis thaliana]

87 aa protein

accession:NP_001321294.1

Alignment Sequence Identical proteins

COP9 signalosome catalytic subunit RRI1 ...

COP9 signalosome catalytic subunit RRI1 [Saccharomyces cerevisiae S288C]

440 aa protein

accession:NP_010065.2

Alignment Sequence Identical proteins

26S proteasome regulatory subunit RPN11, putative ...

26S proteasome regulatory subunit RPN11, putative [Plasmodium falciparum 3D7]

311 aa protein

accession:XP_001350391.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_040872266.1\|	COP9 signalosome complex subunit 5a isoform X1 [Glycine max]	448	448	99%	5e-157	60.94%	XP_040872266.1
2 Select seq ref\|XP_003859772.1\|	metallopeptidase, putative [Leishmania donovani]	172	172	67%	1e-48	35.25%	XP_003859772.1
3 Select seq ref\|NP_010065.2\|	COP9 signalosome catalytic subunit RRI1 [Saccharomyces cerevisiae S288C]	160	160	58%	8e-45	40.29%	NP_010065.2
4 Select seq ref\|XP_001350391.1\|	26S proteasome regulatory subunit RPN11, putative [Plasmodium falciparum 3D7]	133	133	58%	2e-35	38.81%	XP_001350391.1
5 Select seq ref\|NP_001321294.1\|	COP9-signalosome 5B [Arabidopsis thaliana]	93.6	93.6	24%	5e-23	54.02%	NP_001321294.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments