Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001020910.1 large ribosomal subunit protein uL5 [Rattus norvegicus] ... Query length: 167 aa

Large ribosomal subunit protein uL5B ...

Large ribosomal subunit protein uL5B [Caenorhabditis elegans]

196 aa protein

accession:NP_508413.1

Alignment Sequence Identical proteins

ribosomal protein L11, isoform B ...

ribosomal protein L11, isoform B [Drosophila melanogaster]

184 aa protein

accession:NP_001286614.1

Alignment Sequence Identical proteins

large ribosomal subunit protein uL5 ...

large ribosomal subunit protein uL5 [Danio rerio]

178 aa protein

accession:NP_001002139.1

Alignment Sequence Identical proteins

Query: large ribosomal subunit protein uL5 ...

large ribosomal subunit protein uL5 [Rattus norvegicus]

167 aa protein

accession:NP_001020910.1

Sequence Identical proteins

large ribosomal subunit protein uL5 isoform 1 ...

large ribosomal subunit protein uL5 isoform 1 [Homo sapiens]

178 aa protein

accession:NP_000966.2

Alignment Sequence Identical proteins

large ribosomal subunit protein uL5 isoform X1 ...

large ribosomal subunit protein uL5 isoform X1 [Mus musculus]

181 aa protein

accession:XP_006539175.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000966.2\|	large ribosomal subunit protein uL5 isoform 1 [Homo sapiens]	342	342	100%	2e-121	100.00%	NP_000966.2
2 Select seq ref\|XP_006539175.1\|	large ribosomal subunit protein uL5 isoform X1 [Mus musculus]	342	342	100%	2e-121	100.00%	XP_006539175.1
3 Select seq ref\|NP_001002139.1\|	large ribosomal subunit protein uL5 [Danio rerio]	335	335	100%	2e-118	98.20%	NP_001002139.1
4 Select seq ref\|NP_001286614.1\|	ribosomal protein L11, isoform B [Drosophila melanogaster]	301	301	100%	4e-105	85.03%	NP_001286614.1
5 Select seq ref\|NP_508413.1\|	Large ribosomal subunit protein uL5B [Caenorhabditis elegans]	290	290	100%	1e-100	82.63%	NP_508413.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments