Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001024635.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
...
Query length:
341 aa
DOMAINS: and other(s) domains
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collagen alpha-3(VI) chain isoform X5
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collagen alpha-3(VI) chain isoform X5 [Danio rerio]
12627 aa protein
accession:XP_017213295.2
Nematode cuticle collagen N-terminal domain-containing protein
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Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
335 aa protein
accession:NP_508747.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
322 aa protein
accession:NP_491958.1
Cuticle collagen 6
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Cuticle collagen 6 [Caenorhabditis elegans]
329 aa protein
accession:NP_495582.1
Query: Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
341 aa protein
accession:NP_001024635.1
Collagen triple helix repeat protein
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Collagen triple helix repeat protein [Caenorhabditis elegans]
108 aa protein
accession:NP_001379836.1
DOMAINS: and other(s) domains
...
collagen alpha-3(VI) chain isoform X5 [Danio rerio]
12627 aa protein
accession:XP_017213295.2
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
335 aa protein
accession:NP_508747.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
322 aa protein
accession:NP_491958.1
Cuticle collagen 6 [Caenorhabditis elegans]
329 aa protein
accession:NP_495582.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
341 aa protein
accession:NP_001024635.1
Collagen triple helix repeat protein [Caenorhabditis elegans]
108 aa protein
accession:NP_001379836.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 197 | 197 | 31% | 2e-62 | 100.00% | NP_001379836.1 | |
| 2 | 106 | 348 | 52% | 1e-23 | 34.43% | XP_017213295.2 | |
| 3 | 188 | 188 | 98% | 1e-55 | 41.67% | NP_508747.1 | |
| 4 | 169 | 169 | 92% | 1e-48 | 45.57% | NP_491958.1 | |
| 5 | 145 | 145 | 100% | 3e-39 | 44.90% | NP_495582.1 |