Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001028677.1 cleavage stimulation factor subunit 3 isoform 2 [Homo sapiens] ... Query length: 103 aa

Suppressor of forked domain-containing protein ...

Suppressor of forked domain-containing protein [Caenorhabditis elegans]

735 aa protein

accession:NP_495825.1

Alignment Sequence Identical proteins

suppressor of forked, isoform F ...

suppressor of forked, isoform F [Drosophila melanogaster]

765 aa protein

accession:NP_001015241.3

Alignment Sequence Identical proteins

cleavage stimulation factor subunit 3 ...

cleavage stimulation factor subunit 3 [Danio rerio]

716 aa protein

accession:NP_998218.2

Alignment Sequence Identical proteins

cleavage stimulation factor subunit 3 isoform 1 ...

cleavage stimulation factor subunit 3 isoform 1 [Homo sapiens]

717 aa protein

accession:NP_001317.1

Alignment Sequence Identical proteins

Query: cleavage stimulation factor subunit 3 isoform 2 ...

cleavage stimulation factor subunit 3 isoform 2 [Homo sapiens]

103 aa protein

accession:NP_001028677.1

Sequence Identical proteins

cleavage stimulation factor subunit 3 isoform 2 ...

cleavage stimulation factor subunit 3 isoform 2 [Mus musculus]

105 aa protein

accession:NP_796227.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_796227.1\|	cleavage stimulation factor subunit 3 isoform 2 [Mus musculus]	174	174	98%	9e-57	84.62%	NP_796227.1
2 Select seq ref\|NP_001317.1\|	cleavage stimulation factor subunit 3 isoform 1 [Homo sapiens]	157	157	73%	7e-45	98.68%	NP_001317.1
3 Select seq ref\|NP_998218.2\|	cleavage stimulation factor subunit 3 [Danio rerio]	143	143	73%	6e-40	89.47%	NP_998218.2
4 Select seq ref\|NP_495825.1\|	Suppressor of forked domain-containing protein [Caenorhabditis elegans]	80.5	80.5	57%	9e-18	54.24%	NP_495825.1
5 Select seq ref\|NP_001015241.3\|	suppressor of forked, isoform F [Drosophila melanogaster]	75.5	75.5	76%	4e-16	42.68%	NP_001015241.3

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments