Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001030623.1
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
...
Query length:
310 aa
DOMAINS: and other(s) domains
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probable E3 ubiquitin-protein ligase HERC4 isoform 2
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probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
1049 aa protein
accession:NP_080377.2
probable E3 ubiquitin-protein ligase HERC4 isoform X2
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probable E3 ubiquitin-protein ligase HERC4 isoform X2 [Rattus norvegicus]
1049 aa protein
accession:XP_006256197.1
probable E3 ubiquitin-protein ligase HERC3
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probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
1046 aa protein
accession:NP_001139096.1
ultraviolet-B receptor UVR8
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ultraviolet-B receptor UVR8 [Glycine max]
395 aa protein
accession:XP_003555124.1
Query: Regulator of chromosome condensation (RCC1) family protein
...
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
310 aa protein
accession:NP_001030623.1
Regulator of chromosome condensation (RCC1) family protein
...
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
393 aa protein
accession:NP_186900.3
DOMAINS: and other(s) domains
...
probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
1049 aa protein
accession:NP_080377.2
probable E3 ubiquitin-protein ligase HERC4 isoform X2 [Rattus norvegicus]
1049 aa protein
accession:XP_006256197.1
probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
1046 aa protein
accession:NP_001139096.1
ultraviolet-B receptor UVR8 [Glycine max]
395 aa protein
accession:XP_003555124.1
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
310 aa protein
accession:NP_001030623.1
Regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana]
393 aa protein
accession:NP_186900.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 624 | 624 | 99% | 0.0 | 100.00% | NP_186900.3 | |
| 2 | 528 | 528 | 99% | 0.0 | 83.65% | XP_003555124.1 | |
| 3 | 142 | 270 | 97% | 3e-36 | 31.96% | NP_080377.2 | |
| 4 | 142 | 382 | 97% | 3e-36 | 31.31% | NP_001139096.1 | |
| 5 | 140 | 269 | 97% | 1e-35 | 31.25% | XP_006256197.1 |