Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001032863.1 claudin-8 [Rattus norvegicus] ... Query length: 225 aa

claudin-8 ...

claudin-8 [Danio rerio]

271 aa protein

accession:NP_001003733.1

Alignment Sequence Identical proteins

claudin-17 ...

claudin-17 [Rattus norvegicus]

224 aa protein

accession:NP_001100582.1

Alignment Sequence Identical proteins

claudin-17 ...

claudin-17 [Homo sapiens]

224 aa protein

accession:NP_036263.1

Alignment Sequence Identical proteins

claudin-8 ...

claudin-8 [Homo sapiens]

225 aa protein

accession:NP_955360.1

Alignment Sequence Identical proteins

Query: claudin-8 ...

claudin-8 [Rattus norvegicus]

225 aa protein

accession:NP_001032863.1

Sequence Identical proteins

claudin-8 ...

claudin-8 [Mus musculus]

225 aa protein

accession:NP_061248.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_061248.1\|	claudin-8 [Mus musculus]	459	459	100%	1e-165	97.78%	NP_061248.1
2 Select seq ref\|NP_955360.1\|	claudin-8 [Homo sapiens]	406	406	100%	8e-145	83.11%	NP_955360.1
3 Select seq ref\|NP_001100582.1\|	claudin-17 [Rattus norvegicus]	239	239	97%	5e-79	50.67%	NP_001100582.1
4 Select seq ref\|NP_001003733.1\|	claudin-8 [Danio rerio]	228	228	98%	1e-73	48.70%	NP_001003733.1
5 Select seq ref\|NP_036263.1\|	claudin-17 [Homo sapiens]	262	262	95%	5e-88	56.07%	NP_036263.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments