Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001034173.1
large ribosomal subunit protein uL1m isoform 2 [Mus musculus]
...
Query length:
276 aa
DOMAINS: and other(s) domains
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mitochondrial 54S ribosomal protein MRPL1
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mitochondrial 54S ribosomal protein MRPL1 [Saccharomyces cerevisiae S288C]
285 aa protein
accession:NP_010401.1
large ribosomal subunit protein uL1m
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large ribosomal subunit protein uL1m [Danio rerio]
316 aa protein
accession:NP_001191062.1
large ribosomal subunit protein uL1m isoform X1
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large ribosomal subunit protein uL1m isoform X1 [Homo sapiens]
303 aa protein
accession:XP_047272045.1
large ribosomal subunit protein uL1m isoform X2
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large ribosomal subunit protein uL1m isoform X2 [Homo sapiens]
235 aa protein
accession:XP_047272046.1
Query: large ribosomal subunit protein uL1m isoform 2
...
large ribosomal subunit protein uL1m isoform 2 [Mus musculus]
276 aa protein
accession:NP_001034173.1
large ribosomal subunit protein uL1m isoform X3
...
large ribosomal subunit protein uL1m isoform X3 [Rattus norvegicus]
209 aa protein
accession:XP_063128969.1
DOMAINS: and other(s) domains
...
mitochondrial 54S ribosomal protein MRPL1 [Saccharomyces cerevisiae S288C]
285 aa protein
accession:NP_010401.1
large ribosomal subunit protein uL1m [Danio rerio]
316 aa protein
accession:NP_001191062.1
large ribosomal subunit protein uL1m isoform X1 [Homo sapiens]
303 aa protein
accession:XP_047272045.1
large ribosomal subunit protein uL1m isoform X2 [Homo sapiens]
235 aa protein
accession:XP_047272046.1
large ribosomal subunit protein uL1m isoform 2 [Mus musculus]
276 aa protein
accession:NP_001034173.1
large ribosomal subunit protein uL1m isoform X3 [Rattus norvegicus]
209 aa protein
accession:XP_063128969.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 342 | 342 | 89% | 5e-118 | 74.49% | XP_047272045.1 | |
| 2 | 324 | 324 | 69% | 3e-112 | 88.60% | XP_063128969.1 | |
| 3 | 199 | 199 | 96% | 8e-62 | 43.61% | NP_001191062.1 | |
| 4 | 38.5 | 38.5 | 49% | 0.022 | 25.87% | NP_010401.1 | |
| 5 | 315 | 315 | 82% | 3e-108 | 74.24% | XP_047272046.1 |