Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001041295.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
...
Query length:
332 aa
DOMAINS: and other(s) domains
...
collagen alpha-4(VI) chain precursor
...
collagen alpha-4(VI) chain precursor [Mus musculus]
2309 aa protein
accession:NP_081039.2
collagen alpha-3(VI) chain isoform X2
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collagen alpha-3(VI) chain isoform X2 [Rattus norvegicus]
1984 aa protein
accession:XP_063123590.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
281 aa protein
accession:NP_503048.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
285 aa protein
accession:NP_494880.1
Query: Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
332 aa protein
accession:NP_001041295.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
279 aa protein
accession:NP_001041296.1
DOMAINS: and other(s) domains
...
collagen alpha-4(VI) chain precursor [Mus musculus]
2309 aa protein
accession:NP_081039.2
collagen alpha-3(VI) chain isoform X2 [Rattus norvegicus]
1984 aa protein
accession:XP_063123590.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
281 aa protein
accession:NP_503048.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
285 aa protein
accession:NP_494880.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
332 aa protein
accession:NP_001041295.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
279 aa protein
accession:NP_001041296.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 532 | 532 | 84% | 0.0 | 100.00% | NP_001041296.1 | |
| 2 | 90.5 | 336 | 54% | 2e-18 | 40.86% | NP_081039.2 | |
| 3 | 85.9 | 194 | 63% | 7e-17 | 38.22% | XP_063123590.1 | |
| 4 | 247 | 247 | 84% | 1e-79 | 54.23% | NP_503048.1 | |
| 5 | 215 | 215 | 85% | 4e-67 | 56.49% | NP_494880.1 |