Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001071143.1 tripartite motif-containing protein 72 [Rattus norvegicus] ... Query length: 477 aa

E3 ubiquitin-protein ligase TRIM62 isoform X1 ...

E3 ubiquitin-protein ligase TRIM62 isoform X1 [Danio rerio]

490 aa protein

accession:XP_021335341.1

Alignment Sequence Identical proteins

zinc finger protein RFP ...

zinc finger protein RFP [Homo sapiens]

513 aa protein

accession:NP_006501.1

Alignment Sequence Identical proteins

zinc finger protein RFP isoform X1 ...

zinc finger protein RFP isoform X1 [Mus musculus]

513 aa protein

accession:XP_036013819.1

Alignment Sequence Identical proteins

Query: tripartite motif-containing protein 72 ...

tripartite motif-containing protein 72 [Rattus norvegicus]

477 aa protein

accession:NP_001071143.1

Sequence Identical proteins

E3 ubiquitin-protein ligase TRIM50 isoform 2 ...

E3 ubiquitin-protein ligase TRIM50 isoform 2 [Rattus norvegicus]

484 aa protein

accession:NP_001400169.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase TRIM50 isoform X1 ...

E3 ubiquitin-protein ligase TRIM50 isoform X1 [Rattus norvegicus]

452 aa protein

accession:XP_063127224.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001400169.1\|	E3 ubiquitin-protein ligase TRIM50 isoform 2 [Rattus norvegicus]	275	275	97%	4e-86	32.99%	NP_001400169.1
2 Select seq ref\|XP_021335341.1\|	E3 ubiquitin-protein ligase TRIM62 isoform X1 [Danio rerio]	203	203	96%	7e-59	26.54%	XP_021335341.1
3 Select seq ref\|NP_006501.1\|	zinc finger protein RFP [Homo sapiens]	189	189	96%	4e-53	29.01%	NP_006501.1
4 Select seq ref\|XP_036013819.1\|	zinc finger protein RFP isoform X1 [Mus musculus]	188	188	96%	5e-53	29.21%	XP_036013819.1
5 Select seq ref\|XP_063127224.1\|	E3 ubiquitin-protein ligase TRIM50 isoform X1 [Rattus norvegicus]	269	269	97%	3e-84	33.47%	XP_063127224.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments