Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001077775.1
global transcription factor group B1 [Arabidopsis thaliana]
...
Query length:
1642 aa
DOMAINS: and other(s) domains
...
transcription elongation factor SPT6 isoform X2
...
transcription elongation factor SPT6 isoform X2 [Homo sapiens]
1603 aa protein
accession:XP_016880469.1
transcription elongation factor SPT6 isoform X3
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transcription elongation factor SPT6 isoform X3 [Rattus norvegicus]
1603 aa protein
accession:XP_008766230.1
transcription elongation factor SPT6 isoform X1
...
transcription elongation factor SPT6 isoform X1 [Mus musculus]
1603 aa protein
accession:XP_006532806.1
transcription elongation factor SPT6 homolog isoform X1
...
transcription elongation factor SPT6 homolog isoform X1 [Glycine max]
1649 aa protein
accession:XP_006604309.1
Query: global transcription factor group B1
...
global transcription factor group B1 [Arabidopsis thaliana]
1642 aa protein
accession:NP_001077775.1
global transcription factor group B1
...
global transcription factor group B1 [Arabidopsis thaliana]
1647 aa protein
accession:NP_001321759.1
DOMAINS: and other(s) domains
...
transcription elongation factor SPT6 isoform X2 [Homo sapiens]
1603 aa protein
accession:XP_016880469.1
transcription elongation factor SPT6 isoform X3 [Rattus norvegicus]
1603 aa protein
accession:XP_008766230.1
transcription elongation factor SPT6 isoform X1 [Mus musculus]
1603 aa protein
accession:XP_006532806.1
transcription elongation factor SPT6 homolog isoform X1 [Glycine max]
1649 aa protein
accession:XP_006604309.1
global transcription factor group B1 [Arabidopsis thaliana]
1642 aa protein
accession:NP_001077775.1
global transcription factor group B1 [Arabidopsis thaliana]
1647 aa protein
accession:NP_001321759.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 3172 | 3172 | 94% | 0.0 | 99.16% | NP_001321759.1 | |
| 2 | 1990 | 1990 | 90% | 0.0 | 68.10% | XP_006604309.1 | |
| 3 | 509 | 509 | 75% | 2e-151 | 28.57% | XP_016880469.1 | |
| 4 | 505 | 505 | 75% | 4e-150 | 28.27% | XP_008766230.1 | |
| 5 | 503 | 503 | 74% | 2e-149 | 28.30% | XP_006532806.1 |