Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001097319.1
RNA polymerase II, I and III subunit K [Drosophila melanogaster]
...
Query length:
57 aa
DOMAINS: and other(s) domains
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DNA-directed RNA polymerases II, IV and V subunit 12
...
DNA-directed RNA polymerases II, IV and V subunit 12 [Glycine max]
51 aa protein
accession:XP_003534102.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4
...
DNA-directed RNA polymerases I, II, and III subunit RPABC4 [Caenorhabditis elegans]
62 aa protein
accession:NP_501593.1
Query: RNA polymerase II, I and III subunit K
...
RNA polymerase II, I and III subunit K [Drosophila melanogaster]
57 aa protein
accession:NP_001097319.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform a
...
DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform a [Mus musculus]
99 aa protein
accession:NP_001034457.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4
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DNA-directed RNA polymerases I, II, and III subunit RPABC4 [Rattus norvegicus]
58 aa protein
accession:NP_001269254.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4
...
DNA-directed RNA polymerases I, II, and III subunit RPABC4 [Danio rerio]
58 aa protein
accession:NP_001186035.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerases II, IV and V subunit 12 [Glycine max]
51 aa protein
accession:XP_003534102.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4 [Caenorhabditis elegans]
62 aa protein
accession:NP_501593.1
RNA polymerase II, I and III subunit K [Drosophila melanogaster]
57 aa protein
accession:NP_001097319.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4 isoform a [Mus musculus]
99 aa protein
accession:NP_001034457.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4 [Rattus norvegicus]
58 aa protein
accession:NP_001269254.1
DNA-directed RNA polymerases I, II, and III subunit RPABC4 [Danio rerio]
58 aa protein
accession:NP_001186035.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 88.6 | 88.6 | 82% | 8e-24 | 82.98% | NP_001034457.1 | |
| 2 | 86.7 | 86.7 | 98% | 1e-23 | 71.43% | NP_001186035.1 | |
| 3 | 86.3 | 86.3 | 82% | 2e-23 | 82.98% | NP_001269254.1 | |
| 4 | 77.4 | 77.4 | 80% | 7e-20 | 69.57% | NP_501593.1 | |
| 5 | 65.9 | 65.9 | 87% | 2e-15 | 56.00% | XP_003534102.1 |