Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001099215.1
POU domain, class 2, transcription factor 3 [Rattus norvegicus]
...
Query length:
430 aa
DOMAINS: and other(s) domains
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POU domain, class 2, transcription factor 3 isoform X1
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POU domain, class 2, transcription factor 3 isoform X1 [Danio rerio]
399 aa protein
accession:XP_005172050.1
POU domain, class 2, transcription factor 3 isoform 1
...
POU domain, class 2, transcription factor 3 isoform 1 [Homo sapiens]
436 aa protein
accession:NP_055167.2
POU domain, class 2, transcription factor 3 isoform 2
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POU domain, class 2, transcription factor 3 isoform 2 [Homo sapiens]
438 aa protein
accession:NP_001231611.1
Query: POU domain, class 2, transcription factor 3
...
POU domain, class 2, transcription factor 3 [Rattus norvegicus]
430 aa protein
accession:NP_001099215.1
POU domain, class 2, transcription factor 3
...
POU domain, class 2, transcription factor 3 [Mus musculus]
431 aa protein
accession:NP_035269.2
POU domain, class 2, transcription factor 3 isoform X1
...
POU domain, class 2, transcription factor 3 isoform X1 [Mus musculus]
419 aa protein
accession:XP_011240722.1
DOMAINS: and other(s) domains
...
POU domain, class 2, transcription factor 3 isoform X1 [Danio rerio]
399 aa protein
accession:XP_005172050.1
POU domain, class 2, transcription factor 3 isoform 1 [Homo sapiens]
436 aa protein
accession:NP_055167.2
POU domain, class 2, transcription factor 3 isoform 2 [Homo sapiens]
438 aa protein
accession:NP_001231611.1
POU domain, class 2, transcription factor 3 [Rattus norvegicus]
430 aa protein
accession:NP_001099215.1
POU domain, class 2, transcription factor 3 [Mus musculus]
431 aa protein
accession:NP_035269.2
POU domain, class 2, transcription factor 3 isoform X1 [Mus musculus]
419 aa protein
accession:XP_011240722.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 853 | 853 | 100% | 0.0 | 96.98% | NP_035269.2 | |
| 2 | 783 | 783 | 100% | 0.0 | 90.62% | NP_055167.2 | |
| 3 | 406 | 406 | 97% | 5e-139 | 56.13% | XP_005172050.1 | |
| 4 | 827 | 827 | 97% | 0.0 | 96.90% | XP_011240722.1 | |
| 5 | 767 | 767 | 97% | 0.0 | 90.65% | NP_001231611.1 |