Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001099526.1 tripartite motif-containing 52 [Rattus norvegicus] ... Query length: 235 aa

E3 ubiquitin-protein ligase TRIM39-like ...

E3 ubiquitin-protein ligase TRIM39-like [Danio rerio]

534 aa protein

accession:XP_009289874.1

Alignment Sequence Identical proteins

tripartite motif-containing 52 isoform X1 ...

tripartite motif-containing 52 isoform X1 [Rattus norvegicus]

236 aa protein

accession:XP_063130242.1

Alignment Sequence Identical proteins

tripartite motif-containing 52 isoform X3 ...

tripartite motif-containing 52 isoform X3 [Rattus norvegicus]

203 aa protein

accession:XP_063130243.1

Alignment Sequence Identical proteins

Query: tripartite motif-containing 52 ...

tripartite motif-containing 52 [Rattus norvegicus]

235 aa protein

accession:NP_001099526.1

Sequence Identical proteins

tripartite motif-containing 52 ...

tripartite motif-containing 52 [Mus musculus]

233 aa protein

accession:NP_941003.1

Alignment Sequence Identical proteins

E3 ubiquitin-protein ligase TRIM52 isoform 3 ...

E3 ubiquitin-protein ligase TRIM52 isoform 3 [Homo sapiens]

285 aa protein

accession:NP_001332978.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_063130242.1\|	tripartite motif-containing 52 isoform X1 [Rattus norvegicus]	390	390	80%	5e-138	100.00%	XP_063130242.1
2 Select seq ref\|NP_941003.1\|	tripartite motif-containing 52 [Mus musculus]	370	370	100%	1e-130	81.17%	NP_941003.1
3 Select seq ref\|NP_001332978.1\|	E3 ubiquitin-protein ligase TRIM52 isoform 3 [Homo sapiens]	160	160	100%	5e-47	41.63%	NP_001332978.1
4 Select seq ref\|XP_009289874.1\|	E3 ubiquitin-protein ligase TRIM39-like [Danio rerio]	66.6	66.6	20%	3e-11	57.45%	XP_009289874.1
5 Select seq ref\|XP_063130243.1\|	tripartite motif-containing 52 isoform X3 [Rattus norvegicus]	387	387	80%	2e-137	100.00%	XP_063130243.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments