Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001100212.1 mediator of RNA polymerase II transcription subunit 6 [Rattus norvegicus] ... Query length: 246 aa

mediator complex subunit MED6 ...

mediator complex subunit MED6 [Saccharomyces cerevisiae S288C]

295 aa protein

accession:NP_011925.1

Alignment Sequence Identical proteins

hypothetical protein DDB_G0284421 ...

hypothetical protein DDB_G0284421 [Dictyostelium discoideum AX4]

267 aa protein

accession:XP_638621.1

Alignment Sequence Identical proteins

Query: mediator of RNA polymerase II transcription subunit 6 ...

mediator of RNA polymerase II transcription subunit 6 [Rattus norvegicus]

246 aa protein

accession:NP_001100212.1

Sequence Identical proteins

mediator complex subunit 6, isoform E ...

mediator complex subunit 6, isoform E [Drosophila melanogaster]

249 aa protein

accession:NP_001287264.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001287264.1\|	mediator complex subunit 6, isoform E [Drosophila melanogaster]	226	226	99%	1e-73	44.62%	NP_001287264.1
2 Select seq ref\|XP_638621.1\|	hypothetical protein DDB_G0284421 [Dictyostelium discoideum AX4]	115	115	73%	4e-30	38.25%	XP_638621.1
3 Select seq ref\|NP_011925.1\|	mediator complex subunit MED6 [Saccharomyces cerevisiae S288C]	84.3	84.3	56%	3e-18	28.14%	NP_011925.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments