Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_001100397.1 programmed cell death protein 1 precursor [Rattus norvegicus] ... Query length: 287 aa

polymeric immunoglobulin receptor-like ...

polymeric immunoglobulin receptor-like [Danio rerio]

272 aa protein

accession:XP_021331571.1

Alignment Sequence Identical proteins

HERV-H LTR-associating protein 2 isoform c ...

HERV-H LTR-associating protein 2 isoform c [Homo sapiens]

350 aa protein

accession:NP_001269488.1

Alignment Sequence Identical proteins

programmed cell death protein 1 precursor ...

programmed cell death protein 1 precursor [Homo sapiens]

288 aa protein

accession:NP_005009.2

Alignment Sequence Identical proteins

programmed cell death protein 1 isoform X1 ...

programmed cell death protein 1 isoform X1 [Homo sapiens]

198 aa protein

accession:XP_006712636.1

Alignment Sequence Identical proteins

Query: programmed cell death protein 1 precursor ...

programmed cell death protein 1 precursor [Rattus norvegicus]

287 aa protein

accession:NP_001100397.1

Sequence Identical proteins

programmed cell death protein 1 precursor ...

programmed cell death protein 1 precursor [Mus musculus]

288 aa protein

accession:NP_032824.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_032824.1\|	programmed cell death protein 1 precursor [Mus musculus]	486	486	100%	3e-174	86.46%	NP_032824.1
2 Select seq ref\|NP_005009.2\|	programmed cell death protein 1 precursor [Homo sapiens]	296	296	100%	3e-99	58.62%	NP_005009.2
3 Select seq ref\|XP_021331571.1\|	polymeric immunoglobulin receptor-like [Danio rerio]	42.4	42.4	29%	0.003	32.94%	XP_021331571.1
4 Select seq ref\|XP_006712636.1\|	programmed cell death protein 1 isoform X1 [Homo sapiens]	225	225	58%	9e-73	65.27%	XP_006712636.1
5 Select seq ref\|NP_001269488.1\|	HERV-H LTR-associating protein 2 isoform c [Homo sapiens]	44.7	44.7	55%	6e-04	22.98%	NP_001269488.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments