Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_001101667.1
transcription initiation factor TFIID subunit 8 [Rattus norvegicus]
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Query length:
308 aa
DOMAINS: and other(s) domains
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transcription factor TFIID complex subunit 8
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transcription factor TFIID complex subunit 8 [Schizosaccharomyces pombe]
222 aa protein
accession:NP_588062.1
transcription initiation factor TFIID subunit 8
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transcription initiation factor TFIID subunit 8 [Glycine max]
354 aa protein
accession:XP_040864040.1
transcription initiation factor TFIID subunit 8
...
transcription initiation factor TFIID subunit 8 [Danio rerio]
268 aa protein
accession:NP_956580.1
transcription initiation factor TFIID subunit 8 isoform 3
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transcription initiation factor TFIID subunit 8 isoform 3 [Homo sapiens]
311 aa protein
accession:NP_001397836.1
Query: transcription initiation factor TFIID subunit 8
...
transcription initiation factor TFIID subunit 8 [Rattus norvegicus]
308 aa protein
accession:NP_001101667.1
transcription initiation factor TFIID subunit 8 isoform 5
...
transcription initiation factor TFIID subunit 8 isoform 5 [Mus musculus]
305 aa protein
accession:NP_001397117.1
DOMAINS: and other(s) domains
...
transcription factor TFIID complex subunit 8 [Schizosaccharomyces pombe]
222 aa protein
accession:NP_588062.1
transcription initiation factor TFIID subunit 8 [Glycine max]
354 aa protein
accession:XP_040864040.1
transcription initiation factor TFIID subunit 8 [Danio rerio]
268 aa protein
accession:NP_956580.1
transcription initiation factor TFIID subunit 8 isoform 3 [Homo sapiens]
311 aa protein
accession:NP_001397836.1
transcription initiation factor TFIID subunit 8 [Rattus norvegicus]
308 aa protein
accession:NP_001101667.1
transcription initiation factor TFIID subunit 8 isoform 5 [Mus musculus]
305 aa protein
accession:NP_001397117.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 608 | 608 | 99% | 0.0 | 96.72% | NP_001397117.1 | |
| 2 | 597 | 597 | 99% | 0.0 | 95.11% | NP_001397836.1 | |
| 3 | 362 | 362 | 95% | 6e-126 | 62.63% | NP_956580.1 | |
| 4 | 78.2 | 78.2 | 50% | 2e-15 | 28.32% | XP_040864040.1 | |
| 5 | 54.7 | 54.7 | 57% | 7e-08 | 24.42% | NP_588062.1 |